Gene : Phvul.002G325200 P. vulgaris v2.1
Defline:  (1 of 2) PTHR22937:SF18 - F6A14.12 PROTEIN-RELATED Genomic Order:  3248
Name:  ? Phvul.002G325200 Secondary Identifier:  ? PAC:37175097
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G325200 0.5kb upstream 0.5kb upstream 4625 true Chr02: 49016658-49021282 Phaseolus vulgaris
Phvul.002G325200 0.5kb upstream 0.5kb upstream 500 false Chr02: 49016658-49017157 Phaseolus vulgaris
Phvul.002G325200 0.5kb downstream 0.5kb downstream 4625 true Chr02: 49017158-49021782 Phaseolus vulgaris
Phvul.002G325200 0.5kb downstream 0.5kb downstream 500 false Chr02: 49021283-49021782 Phaseolus vulgaris
Phvul.002G325200 1.0kb upstream 1.0kb upstream 5125 true Chr02: 49016158-49021282 Phaseolus vulgaris
Phvul.002G325200 1.0kb upstream 1.0kb upstream 1000 false Chr02: 49016158-49017157 Phaseolus vulgaris
Phvul.002G325200 1.0kb downstream 1.0kb downstream 5125 true Chr02: 49017158-49022282 Phaseolus vulgaris
Phvul.002G325200 1.0kb downstream 1.0kb downstream 1000 false Chr02: 49021283-49022282 Phaseolus vulgaris
Phvul.002G325200 2.0kb upstream 2.0kb upstream 6125 true Chr02: 49015158-49021282 Phaseolus vulgaris
Phvul.002G325200 2.0kb upstream 2.0kb upstream 2000 false Chr02: 49015158-49017157 Phaseolus vulgaris
Phvul.002G325200 2.0kb downstream 2.0kb downstream 6125 true Chr02: 49017158-49023282 Phaseolus vulgaris
Phvul.002G325200 2.0kb downstream 2.0kb downstream 2000 false Chr02: 49021283-49023282 Phaseolus vulgaris
Phvul.002G325200 5.0kb upstream 5.0kb upstream 9125 true Chr02: 49012158-49021282 Phaseolus vulgaris
Phvul.002G325200 5.0kb upstream 5.0kb upstream 5000 false Chr02: 49012158-49017157 Phaseolus vulgaris
Phvul.002G325200 5.0kb downstream 5.0kb downstream 9125 true Chr02: 49017158-49026282 Phaseolus vulgaris
Phvul.002G325200 5.0kb downstream 5.0kb downstream 5000 false Chr02: 49021283-49026282 Phaseolus vulgaris
Phvul.002G325200 10.0kb upstream 10.0kb upstream 14125 true Chr02: 49007158-49021282 Phaseolus vulgaris
Phvul.002G325200 10.0kb upstream 10.0kb upstream 10000 false Chr02: 49007158-49017157 Phaseolus vulgaris
Phvul.002G325200 10.0kb downstream 10.0kb downstream 14125 true Chr02: 49017158-49031282 Phaseolus vulgaris
Phvul.002G325200 10.0kb downstream 10.0kb downstream 10000 false Chr02: 49021283-49031282 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026372 5273 Angiosperm View MSA
122311099 5265 Fabidae View MSA
124065155 5270 Rosid View MSA
123747063 5271 Pentapetalae View MSA
122788890 5272 Eudicot View MSA
123429130 5275 Viridiplantae View MSA
121296298 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.9708 0.0 29.5245   Low
cufflinks 36.7507 0.0 95.2907 High  
cufflinks 33.202 0.0 85.9567    
cufflinks 13.8626 0.0 36.7438   Low
cufflinks 30.3382 0.0 78.423    
cufflinks 33.3427 0.0 86.3048 High  
cufflinks 22.8037 0.0 59.0315    
cufflinks 41.8984 0.0 109.248 High High
cufflinks 12.0843 0.0 32.2332   Low
cufflinks 17.5717 0.0 45.9022    
cufflinks 39.239 0.0 101.852 High  

0 Strain