Gene : Phvul.002G326300 P. vulgaris v2.1
Defline:  (1 of 1) 3.6.4.9 - Chaperonin ATPase / Chaperonin Genomic Order:  3259
Name:  ? Phvul.002G326300 Secondary Identifier:  ? PAC:37175997
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G326300 0.5kb upstream 0.5kb upstream 2891 true Chr02: 49090552-49093442 Phaseolus vulgaris
Phvul.002G326300 0.5kb upstream 0.5kb upstream 500 false Chr02: 49092943-49093442 Phaseolus vulgaris
Phvul.002G326300 0.5kb downstream 0.5kb downstream 2891 true Chr02: 49090052-49092942 Phaseolus vulgaris
Phvul.002G326300 0.5kb downstream 0.5kb downstream 500 false Chr02: 49090052-49090551 Phaseolus vulgaris
Phvul.002G326300 1.0kb upstream 1.0kb upstream 3391 true Chr02: 49090552-49093942 Phaseolus vulgaris
Phvul.002G326300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 49092943-49093942 Phaseolus vulgaris
Phvul.002G326300 1.0kb downstream 1.0kb downstream 3391 true Chr02: 49089552-49092942 Phaseolus vulgaris
Phvul.002G326300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 49089552-49090551 Phaseolus vulgaris
Phvul.002G326300 2.0kb upstream 2.0kb upstream 4391 true Chr02: 49090552-49094942 Phaseolus vulgaris
Phvul.002G326300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 49092943-49094942 Phaseolus vulgaris
Phvul.002G326300 2.0kb downstream 2.0kb downstream 4391 true Chr02: 49088552-49092942 Phaseolus vulgaris
Phvul.002G326300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 49088552-49090551 Phaseolus vulgaris
Phvul.002G326300 5.0kb upstream 5.0kb upstream 7391 true Chr02: 49090552-49097942 Phaseolus vulgaris
Phvul.002G326300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 49092943-49097942 Phaseolus vulgaris
Phvul.002G326300 5.0kb downstream 5.0kb downstream 7391 true Chr02: 49085552-49092942 Phaseolus vulgaris
Phvul.002G326300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 49085552-49090551 Phaseolus vulgaris
Phvul.002G326300 10.0kb upstream 10.0kb upstream 12391 true Chr02: 49090552-49102942 Phaseolus vulgaris
Phvul.002G326300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 49092943-49102942 Phaseolus vulgaris
Phvul.002G326300 10.0kb downstream 10.0kb downstream 12391 true Chr02: 49080552-49092942 Phaseolus vulgaris
Phvul.002G326300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 49080552-49090551 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041248 5273 Angiosperm View MSA
122305362 5265 Fabidae View MSA
124061732 5270 Rosid View MSA
123744760 5271 Pentapetalae View MSA
122793416 5272 Eudicot View MSA
121345664 5274 Embryophyte View MSA
123424288 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.9294 0.0 100.725 High Low
cufflinks 91.5465 0.0 265.583 High High
cufflinks 40.12 0.0 106.72 High Low
cufflinks 81.8399 0.0 234.805 High  
cufflinks 79.878 0.0 229.271 High  
cufflinks 53.1798 0.0 145.021 High  
cufflinks 52.0201 0.0 142.39 High  
cufflinks 54.1229 0.0 147.852 High  
cufflinks 82.4266 0.0 236.713 High  
cufflinks 51.5466 0.0 140.405 High  
cufflinks 82.9545 0.0 239.048 High  

0 Strain