Gene : Phvul.002G324100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31065:SF15 - PLATZ TRANSCRIPTION FACTOR FAMILY PROTEIN Genomic Order:  3237
Name:  ? Phvul.002G324100 Secondary Identifier:  ? PAC:37176416
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G324100 0.5kb upstream 0.5kb upstream 2981 true Chr02: 48905746-48908726 Phaseolus vulgaris
Phvul.002G324100 0.5kb upstream 0.5kb upstream 500 false Chr02: 48905746-48906245 Phaseolus vulgaris
Phvul.002G324100 0.5kb downstream 0.5kb downstream 2981 true Chr02: 48906246-48909226 Phaseolus vulgaris
Phvul.002G324100 0.5kb downstream 0.5kb downstream 500 false Chr02: 48908727-48909226 Phaseolus vulgaris
Phvul.002G324100 1.0kb upstream 1.0kb upstream 3481 true Chr02: 48905246-48908726 Phaseolus vulgaris
Phvul.002G324100 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48905246-48906245 Phaseolus vulgaris
Phvul.002G324100 1.0kb downstream 1.0kb downstream 3481 true Chr02: 48906246-48909726 Phaseolus vulgaris
Phvul.002G324100 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48908727-48909726 Phaseolus vulgaris
Phvul.002G324100 2.0kb upstream 2.0kb upstream 4481 true Chr02: 48904246-48908726 Phaseolus vulgaris
Phvul.002G324100 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48904246-48906245 Phaseolus vulgaris
Phvul.002G324100 2.0kb downstream 2.0kb downstream 4481 true Chr02: 48906246-48910726 Phaseolus vulgaris
Phvul.002G324100 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48908727-48910726 Phaseolus vulgaris
Phvul.002G324100 5.0kb upstream 5.0kb upstream 7481 true Chr02: 48901246-48908726 Phaseolus vulgaris
Phvul.002G324100 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48901246-48906245 Phaseolus vulgaris
Phvul.002G324100 5.0kb downstream 5.0kb downstream 7481 true Chr02: 48906246-48913726 Phaseolus vulgaris
Phvul.002G324100 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48908727-48913726 Phaseolus vulgaris
Phvul.002G324100 10.0kb upstream 10.0kb upstream 12481 true Chr02: 48896246-48908726 Phaseolus vulgaris
Phvul.002G324100 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48896246-48906245 Phaseolus vulgaris
Phvul.002G324100 10.0kb downstream 10.0kb downstream 12481 true Chr02: 48906246-48918726 Phaseolus vulgaris
Phvul.002G324100 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48908727-48918726 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121791790 5273 Angiosperm View MSA
122307174 5265 Fabidae View MSA
124061257 5270 Rosid View MSA
123743284 5271 Pentapetalae View MSA
122793533 5272 Eudicot View MSA
121063080 5274 Embryophyte View MSA
123102864 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.4063 0.0 10.8597    
cufflinks 5.57944 0.0 16.8851   High
cufflinks 2.69086 0.0 8.79682   Low
cufflinks 4.74961 0.0 14.6773    
cufflinks 4.51051 0.0 14.022    
cufflinks 2.56632 0.0 8.48048   Low
cufflinks 3.59912 0.0 11.4138    
cufflinks 6.3435 0.0 18.7626   High
cufflinks 2.62863 0.0 8.67306   Low
cufflinks 3.71237 0.0 11.7694    
cufflinks 4.57936 0.0 14.2297    

0 Strain