Gene : Phvul.002G311300 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32208:SF29 - F1N21.11-RELATED Genomic Order:  3102
Name:  ? Phvul.002G311300 Secondary Identifier:  ? PAC:37175276
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G311300 0.5kb upstream 0.5kb upstream 2972 true Chr02: 47815665-47818636 Phaseolus vulgaris
Phvul.002G311300 0.5kb upstream 0.5kb upstream 500 false Chr02: 47818137-47818636 Phaseolus vulgaris
Phvul.002G311300 0.5kb downstream 0.5kb downstream 2972 true Chr02: 47815165-47818136 Phaseolus vulgaris
Phvul.002G311300 0.5kb downstream 0.5kb downstream 500 false Chr02: 47815165-47815664 Phaseolus vulgaris
Phvul.002G311300 1.0kb upstream 1.0kb upstream 3472 true Chr02: 47815665-47819136 Phaseolus vulgaris
Phvul.002G311300 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47818137-47819136 Phaseolus vulgaris
Phvul.002G311300 1.0kb downstream 1.0kb downstream 3472 true Chr02: 47814665-47818136 Phaseolus vulgaris
Phvul.002G311300 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47814665-47815664 Phaseolus vulgaris
Phvul.002G311300 2.0kb upstream 2.0kb upstream 4472 true Chr02: 47815665-47820136 Phaseolus vulgaris
Phvul.002G311300 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47818137-47820136 Phaseolus vulgaris
Phvul.002G311300 2.0kb downstream 2.0kb downstream 4472 true Chr02: 47813665-47818136 Phaseolus vulgaris
Phvul.002G311300 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47813665-47815664 Phaseolus vulgaris
Phvul.002G311300 5.0kb upstream 5.0kb upstream 7472 true Chr02: 47815665-47823136 Phaseolus vulgaris
Phvul.002G311300 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47818137-47823136 Phaseolus vulgaris
Phvul.002G311300 5.0kb downstream 5.0kb downstream 7472 true Chr02: 47810665-47818136 Phaseolus vulgaris
Phvul.002G311300 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47810665-47815664 Phaseolus vulgaris
Phvul.002G311300 10.0kb upstream 10.0kb upstream 12472 true Chr02: 47815665-47828136 Phaseolus vulgaris
Phvul.002G311300 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47818137-47828136 Phaseolus vulgaris
Phvul.002G311300 10.0kb downstream 10.0kb downstream 12472 true Chr02: 47805665-47818136 Phaseolus vulgaris
Phvul.002G311300 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47805665-47815664 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311230 5265 Fabidae View MSA
124068821 5270 Rosid View MSA
123738596 5271 Pentapetalae View MSA
122792068 5272 Eudicot View MSA
122050502 5273 Angiosperm View MSA
123428969 5275 Viridiplantae View MSA
121350971 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 34.0126 0.0 88.842 High High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0259342 0.0 0.121131 Low  
cufflinks 24.5081 0.0 63.4271   High
cufflinks 0.0252691 0.0 0.118652 Low  
cufflinks 0.0192198 0.0 0.0926686 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0243048 0.0 0.114091 Low  
cufflinks 0.0351727 0.0 0.158928 Low  
cufflinks 0.0318481 0.0 0.146051 Low  
cufflinks 0.0152134 0.0 0.0754743 Low  

0 Strain