Gene : Phvul.002G312400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10460//PTHR10460:SF11 - ABL INTERACTOR // SUBFAMILY NOT NAMED Genomic Order:  3116
Name:  ? Phvul.002G312400 Secondary Identifier:  ? PAC:37175367
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G312400 0.5kb upstream 0.5kb upstream 2993 true Chr02: 47942982-47945974 Phaseolus vulgaris
Phvul.002G312400 0.5kb upstream 0.5kb upstream 500 false Chr02: 47942982-47943481 Phaseolus vulgaris
Phvul.002G312400 0.5kb downstream 0.5kb downstream 2993 true Chr02: 47943482-47946474 Phaseolus vulgaris
Phvul.002G312400 0.5kb downstream 0.5kb downstream 500 false Chr02: 47945975-47946474 Phaseolus vulgaris
Phvul.002G312400 1.0kb upstream 1.0kb upstream 3493 true Chr02: 47942482-47945974 Phaseolus vulgaris
Phvul.002G312400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 47942482-47943481 Phaseolus vulgaris
Phvul.002G312400 1.0kb downstream 1.0kb downstream 3493 true Chr02: 47943482-47946974 Phaseolus vulgaris
Phvul.002G312400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 47945975-47946974 Phaseolus vulgaris
Phvul.002G312400 2.0kb upstream 2.0kb upstream 4493 true Chr02: 47941482-47945974 Phaseolus vulgaris
Phvul.002G312400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 47941482-47943481 Phaseolus vulgaris
Phvul.002G312400 2.0kb downstream 2.0kb downstream 4493 true Chr02: 47943482-47947974 Phaseolus vulgaris
Phvul.002G312400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 47945975-47947974 Phaseolus vulgaris
Phvul.002G312400 5.0kb upstream 5.0kb upstream 7493 true Chr02: 47938482-47945974 Phaseolus vulgaris
Phvul.002G312400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 47938482-47943481 Phaseolus vulgaris
Phvul.002G312400 5.0kb downstream 5.0kb downstream 7493 true Chr02: 47943482-47950974 Phaseolus vulgaris
Phvul.002G312400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 47945975-47950974 Phaseolus vulgaris
Phvul.002G312400 10.0kb upstream 10.0kb upstream 12493 true Chr02: 47933482-47945974 Phaseolus vulgaris
Phvul.002G312400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 47933482-47943481 Phaseolus vulgaris
Phvul.002G312400 10.0kb downstream 10.0kb downstream 12493 true Chr02: 47943482-47955974 Phaseolus vulgaris
Phvul.002G312400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 47945975-47955974 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026739 5273 Angiosperm View MSA
122254977 5265 Fabidae View MSA
124070199 5270 Rosid View MSA
123749671 5271 Pentapetalae View MSA
122794386 5272 Eudicot View MSA
121296518 5274 Embryophyte View MSA
123334666 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.62035 0.0 8.81349    
cufflinks 9.02272 0.0 26.3644    
cufflinks 1.96845 0.0 6.81317    
cufflinks 1.06326 0.0 3.92673   Low
cufflinks 14.4378 0.0 40.559    
cufflinks 4.40261 0.0 13.9597    
cufflinks 10.8842 0.0 31.1526    
cufflinks 60.5024 0.0 156.54 High High
cufflinks 3.31945 0.0 10.8765    
cufflinks 0.466732 0.0 1.83934   Low
cufflinks 8.3497 0.0 24.7812    

0 Strain