Gene : Phvul.002G314900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11941:SF47 - 3-HYDROXYISOBUTYRYL-COA HYDROLASE-LIKE PROTEIN 3, MITOCHONDRIAL-RELATED Genomic Order:  3142
Name:  ? Phvul.002G314900 Secondary Identifier:  ? PAC:37176446
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7574 Phaseolus vulgaris pathologic  
Pvulgaris VALDEG-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G314900 0.5kb upstream 0.5kb upstream 5993 true Chr02: 48162444-48168436 Phaseolus vulgaris
Phvul.002G314900 0.5kb upstream 0.5kb upstream 500 false Chr02: 48162444-48162943 Phaseolus vulgaris
Phvul.002G314900 0.5kb downstream 0.5kb downstream 5993 true Chr02: 48162944-48168936 Phaseolus vulgaris
Phvul.002G314900 0.5kb downstream 0.5kb downstream 500 false Chr02: 48168437-48168936 Phaseolus vulgaris
Phvul.002G314900 1.0kb upstream 1.0kb upstream 6493 true Chr02: 48161944-48168436 Phaseolus vulgaris
Phvul.002G314900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48161944-48162943 Phaseolus vulgaris
Phvul.002G314900 1.0kb downstream 1.0kb downstream 6493 true Chr02: 48162944-48169436 Phaseolus vulgaris
Phvul.002G314900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48168437-48169436 Phaseolus vulgaris
Phvul.002G314900 2.0kb upstream 2.0kb upstream 7493 true Chr02: 48160944-48168436 Phaseolus vulgaris
Phvul.002G314900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48160944-48162943 Phaseolus vulgaris
Phvul.002G314900 2.0kb downstream 2.0kb downstream 7493 true Chr02: 48162944-48170436 Phaseolus vulgaris
Phvul.002G314900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48168437-48170436 Phaseolus vulgaris
Phvul.002G314900 5.0kb upstream 5.0kb upstream 10493 true Chr02: 48157944-48168436 Phaseolus vulgaris
Phvul.002G314900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48157944-48162943 Phaseolus vulgaris
Phvul.002G314900 5.0kb downstream 5.0kb downstream 10493 true Chr02: 48162944-48173436 Phaseolus vulgaris
Phvul.002G314900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48168437-48173436 Phaseolus vulgaris
Phvul.002G314900 10.0kb upstream 10.0kb upstream 15493 true Chr02: 48152944-48168436 Phaseolus vulgaris
Phvul.002G314900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48152944-48162943 Phaseolus vulgaris
Phvul.002G314900 10.0kb downstream 10.0kb downstream 15493 true Chr02: 48162944-48178436 Phaseolus vulgaris
Phvul.002G314900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48168437-48178436 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312703 5265 Fabidae View MSA
124062790 5270 Rosid View MSA
123736402 5271 Pentapetalae View MSA
122794984 5272 Eudicot View MSA
122043157 5273 Angiosperm View MSA
121344613 5274 Embryophyte View MSA
123428448 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 37.1721 0.0 106.583 High High
cufflinks 29.57 0.0 84.3351    
cufflinks 26.8699 0.0 78.6149    
cufflinks 43.1716 0.0 126.087 High High
cufflinks 25.2265 0.0 72.3911    
cufflinks 22.2861 0.0 64.4816    
cufflinks 20.1117 0.0 65.2188   Low
cufflinks 22.6119 0.0 66.041    
cufflinks 24.3173 0.0 70.572    
cufflinks 35.546 0.0 102.389   High
cufflinks 28.7405 0.0 82.0658    

0 Strain