Gene : Phvul.002G313800 P. vulgaris v2.1
Defline:  (1 of 3) PTHR33168:SF12 - EXPRESSED PROTEIN Genomic Order:  3131
Name:  ? Phvul.002G313800 Secondary Identifier:  ? PAC:37174694
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G313800 0.5kb upstream 0.5kb upstream 1066 true Chr02: 48052682-48053747 Phaseolus vulgaris
Phvul.002G313800 0.5kb upstream 0.5kb upstream 500 false Chr02: 48052682-48053181 Phaseolus vulgaris
Phvul.002G313800 0.5kb downstream 0.5kb downstream 1066 true Chr02: 48053182-48054247 Phaseolus vulgaris
Phvul.002G313800 0.5kb downstream 0.5kb downstream 500 false Chr02: 48053748-48054247 Phaseolus vulgaris
Phvul.002G313800 1.0kb upstream 1.0kb upstream 1566 true Chr02: 48052182-48053747 Phaseolus vulgaris
Phvul.002G313800 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48052182-48053181 Phaseolus vulgaris
Phvul.002G313800 1.0kb downstream 1.0kb downstream 1566 true Chr02: 48053182-48054747 Phaseolus vulgaris
Phvul.002G313800 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48053748-48054747 Phaseolus vulgaris
Phvul.002G313800 2.0kb upstream 2.0kb upstream 2566 true Chr02: 48051182-48053747 Phaseolus vulgaris
Phvul.002G313800 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48051182-48053181 Phaseolus vulgaris
Phvul.002G313800 2.0kb downstream 2.0kb downstream 2566 true Chr02: 48053182-48055747 Phaseolus vulgaris
Phvul.002G313800 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48053748-48055747 Phaseolus vulgaris
Phvul.002G313800 5.0kb upstream 5.0kb upstream 5566 true Chr02: 48048182-48053747 Phaseolus vulgaris
Phvul.002G313800 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48048182-48053181 Phaseolus vulgaris
Phvul.002G313800 5.0kb downstream 5.0kb downstream 5566 true Chr02: 48053182-48058747 Phaseolus vulgaris
Phvul.002G313800 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48053748-48058747 Phaseolus vulgaris
Phvul.002G313800 10.0kb upstream 10.0kb upstream 10566 true Chr02: 48043182-48053747 Phaseolus vulgaris
Phvul.002G313800 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48043182-48053181 Phaseolus vulgaris
Phvul.002G313800 10.0kb downstream 10.0kb downstream 10566 true Chr02: 48053182-48063747 Phaseolus vulgaris
Phvul.002G313800 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48053748-48063747 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313487 5265 Fabidae View MSA
124074176 5270 Rosid View MSA
123744638 5271 Pentapetalae View MSA
122795740 5272 Eudicot View MSA
122048464 5273 Angiosperm View MSA
121310979 5274 Embryophyte View MSA
123348342 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.174963 0.0 0.805338 Low  
cufflinks 0.167689 0.0 0.777372 Low  
cufflinks 0.149484 0.0 0.698197 Low  
cufflinks 3.99964 0.0 13.986   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.228788 0.0 1.0268 Low  
cufflinks 0.604343 0.0 2.48465    
cufflinks 3.81749 0.0 13.4354   High
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0477826 0.0 0.255584 Low Low
cufflinks 0.375674 0.0 1.61679 Low  

0 Strain