Gene : Phvul.002G313900 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31791:SF10 - FRIGIDA-LIKE PROTEIN 1-RELATED Genomic Order:  3132
Name:  ? Phvul.002G313900 Secondary Identifier:  ? PAC:37175363
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G313900 0.5kb upstream 0.5kb upstream 5535 true Chr02: 48055904-48061438 Phaseolus vulgaris
Phvul.002G313900 0.5kb upstream 0.5kb upstream 500 false Chr02: 48055904-48056403 Phaseolus vulgaris
Phvul.002G313900 0.5kb downstream 0.5kb downstream 5535 true Chr02: 48056404-48061938 Phaseolus vulgaris
Phvul.002G313900 0.5kb downstream 0.5kb downstream 500 false Chr02: 48061439-48061938 Phaseolus vulgaris
Phvul.002G313900 1.0kb upstream 1.0kb upstream 6035 true Chr02: 48055404-48061438 Phaseolus vulgaris
Phvul.002G313900 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48055404-48056403 Phaseolus vulgaris
Phvul.002G313900 1.0kb downstream 1.0kb downstream 6035 true Chr02: 48056404-48062438 Phaseolus vulgaris
Phvul.002G313900 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48061439-48062438 Phaseolus vulgaris
Phvul.002G313900 2.0kb upstream 2.0kb upstream 7035 true Chr02: 48054404-48061438 Phaseolus vulgaris
Phvul.002G313900 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48054404-48056403 Phaseolus vulgaris
Phvul.002G313900 2.0kb downstream 2.0kb downstream 7035 true Chr02: 48056404-48063438 Phaseolus vulgaris
Phvul.002G313900 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48061439-48063438 Phaseolus vulgaris
Phvul.002G313900 5.0kb upstream 5.0kb upstream 10035 true Chr02: 48051404-48061438 Phaseolus vulgaris
Phvul.002G313900 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48051404-48056403 Phaseolus vulgaris
Phvul.002G313900 5.0kb downstream 5.0kb downstream 10035 true Chr02: 48056404-48066438 Phaseolus vulgaris
Phvul.002G313900 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48061439-48066438 Phaseolus vulgaris
Phvul.002G313900 10.0kb upstream 10.0kb upstream 15035 true Chr02: 48046404-48061438 Phaseolus vulgaris
Phvul.002G313900 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48046404-48056403 Phaseolus vulgaris
Phvul.002G313900 10.0kb downstream 10.0kb downstream 15035 true Chr02: 48056404-48071438 Phaseolus vulgaris
Phvul.002G313900 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48061439-48071438 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301584 5265 Fabidae View MSA
124070962 5270 Rosid View MSA
123742663 5271 Pentapetalae View MSA
122794855 5272 Eudicot View MSA
122049727 5273 Angiosperm View MSA
121311561 5274 Embryophyte View MSA
123348841 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.95911 0.0 18.7681   Low
cufflinks 14.7622 0.0 38.2547    
cufflinks 15.1067 0.0 39.1733    
cufflinks 10.6476 0.0 27.8968    
cufflinks 14.8464 0.0 38.4555    
cufflinks 12.9996 0.0 33.814    
cufflinks 13.8952 0.0 36.0061    
cufflinks 20.7074 0.0 53.5589   High
cufflinks 14.8844 0.0 38.5322    
cufflinks 20.949 0.0 54.1881   High
cufflinks 14.4024 0.0 37.3141    

0 Strain