Gene : Phvul.002G316400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10759//PTHR10759:SF6 - 60S RIBOSOMAL PROTEIN L34 // SUBFAMILY NOT NAMED Genomic Order:  3157
Name:  ? Phvul.002G316400 Secondary Identifier:  ? PAC:37176402
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.002G316400 0.5kb upstream 0.5kb upstream 3643 true Chr02: 48301847-48305489 Phaseolus vulgaris
Phvul.002G316400 0.5kb upstream 0.5kb upstream 500 false Chr02: 48304990-48305489 Phaseolus vulgaris
Phvul.002G316400 0.5kb downstream 0.5kb downstream 3643 true Chr02: 48301347-48304989 Phaseolus vulgaris
Phvul.002G316400 0.5kb downstream 0.5kb downstream 500 false Chr02: 48301347-48301846 Phaseolus vulgaris
Phvul.002G316400 1.0kb upstream 1.0kb upstream 4143 true Chr02: 48301847-48305989 Phaseolus vulgaris
Phvul.002G316400 1.0kb upstream 1.0kb upstream 1000 false Chr02: 48304990-48305989 Phaseolus vulgaris
Phvul.002G316400 1.0kb downstream 1.0kb downstream 4143 true Chr02: 48300847-48304989 Phaseolus vulgaris
Phvul.002G316400 1.0kb downstream 1.0kb downstream 1000 false Chr02: 48300847-48301846 Phaseolus vulgaris
Phvul.002G316400 2.0kb upstream 2.0kb upstream 5143 true Chr02: 48301847-48306989 Phaseolus vulgaris
Phvul.002G316400 2.0kb upstream 2.0kb upstream 2000 false Chr02: 48304990-48306989 Phaseolus vulgaris
Phvul.002G316400 2.0kb downstream 2.0kb downstream 5143 true Chr02: 48299847-48304989 Phaseolus vulgaris
Phvul.002G316400 2.0kb downstream 2.0kb downstream 2000 false Chr02: 48299847-48301846 Phaseolus vulgaris
Phvul.002G316400 5.0kb upstream 5.0kb upstream 8143 true Chr02: 48301847-48309989 Phaseolus vulgaris
Phvul.002G316400 5.0kb upstream 5.0kb upstream 5000 false Chr02: 48304990-48309989 Phaseolus vulgaris
Phvul.002G316400 5.0kb downstream 5.0kb downstream 8143 true Chr02: 48296847-48304989 Phaseolus vulgaris
Phvul.002G316400 5.0kb downstream 5.0kb downstream 5000 false Chr02: 48296847-48301846 Phaseolus vulgaris
Phvul.002G316400 10.0kb upstream 10.0kb upstream 13143 true Chr02: 48301847-48314989 Phaseolus vulgaris
Phvul.002G316400 10.0kb upstream 10.0kb upstream 10000 false Chr02: 48304990-48314989 Phaseolus vulgaris
Phvul.002G316400 10.0kb downstream 10.0kb downstream 13143 true Chr02: 48291847-48304989 Phaseolus vulgaris
Phvul.002G316400 10.0kb downstream 10.0kb downstream 10000 false Chr02: 48291847-48301846 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296388 5265 Fabidae View MSA
124068930 5270 Rosid View MSA
123742877 5271 Pentapetalae View MSA
122788771 5272 Eudicot View MSA
122042848 5273 Angiosperm View MSA
121310034 5274 Embryophyte View MSA
123347637 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.108445 0.0 0.444151 Low Low
cufflinks 0.879108 0.0 3.00725    
cufflinks 0.515134 0.0 1.85145 Low  
cufflinks 0.219449 0.0 0.857087 Low  
cufflinks 1.44175 0.0 4.70805    
cufflinks 0.89241 0.0 3.04154    
cufflinks 2.05348 0.0 6.36537    
cufflinks 0.487144 0.0 1.75868    
cufflinks 1.48245 0.0 4.7751    
cufflinks 0.0166595 0.0 0.0822319 Low Low
cufflinks 1.96987 0.0 6.19355    

0 Strain