Gene : Phvul.003G102000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10168:SF115 - MONOTHIOL GLUTAREDOXIN-S2-RELATED Genomic Order:  1018
Name:  ? Phvul.003G102000 Secondary Identifier:  ? PAC:37144981
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris THIOREDOX-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G102000 0.5kb upstream 0.5kb upstream 1529 true Chr03: 24377179-24378707 Phaseolus vulgaris
Phvul.003G102000 0.5kb upstream 0.5kb upstream 500 false Chr03: 24378208-24378707 Phaseolus vulgaris
Phvul.003G102000 0.5kb downstream 0.5kb downstream 1529 true Chr03: 24376679-24378207 Phaseolus vulgaris
Phvul.003G102000 0.5kb downstream 0.5kb downstream 500 false Chr03: 24376679-24377178 Phaseolus vulgaris
Phvul.003G102000 1.0kb upstream 1.0kb upstream 2029 true Chr03: 24377179-24379207 Phaseolus vulgaris
Phvul.003G102000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 24378208-24379207 Phaseolus vulgaris
Phvul.003G102000 1.0kb downstream 1.0kb downstream 2029 true Chr03: 24376179-24378207 Phaseolus vulgaris
Phvul.003G102000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 24376179-24377178 Phaseolus vulgaris
Phvul.003G102000 2.0kb upstream 2.0kb upstream 3029 true Chr03: 24377179-24380207 Phaseolus vulgaris
Phvul.003G102000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 24378208-24380207 Phaseolus vulgaris
Phvul.003G102000 2.0kb downstream 2.0kb downstream 3029 true Chr03: 24375179-24378207 Phaseolus vulgaris
Phvul.003G102000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 24375179-24377178 Phaseolus vulgaris
Phvul.003G102000 5.0kb upstream 5.0kb upstream 6029 true Chr03: 24377179-24383207 Phaseolus vulgaris
Phvul.003G102000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 24378208-24383207 Phaseolus vulgaris
Phvul.003G102000 5.0kb downstream 5.0kb downstream 6029 true Chr03: 24372179-24378207 Phaseolus vulgaris
Phvul.003G102000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 24372179-24377178 Phaseolus vulgaris
Phvul.003G102000 10.0kb upstream 10.0kb upstream 11029 true Chr03: 24377179-24388207 Phaseolus vulgaris
Phvul.003G102000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 24378208-24388207 Phaseolus vulgaris
Phvul.003G102000 10.0kb downstream 10.0kb downstream 11029 true Chr03: 24367179-24378207 Phaseolus vulgaris
Phvul.003G102000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 24367179-24377178 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310406 5265 Fabidae View MSA
124065787 5270 Rosid View MSA
123750086 5271 Pentapetalae View MSA
122796200 5272 Eudicot View MSA
122047042 5273 Angiosperm View MSA
121349593 5274 Embryophyte View MSA
123381368 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 26.1889 0.0 70.5217   High
cufflinks 10.2046 0.0 30.0963    
cufflinks 8.83773 0.0 26.4234    
cufflinks 1.40684 0.0 5.16463    
cufflinks 3.6891 0.0 12.285    
cufflinks 0.193087 0.0 0.833155 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 4.56971 0.0 14.7939    
cufflinks 0.103277 0.0 0.475814 Low Low

0 Strain