Gene : Phvul.003G106700 P. vulgaris v2.1
Defline:  (1 of 1) 2.3.1.168 - Dihydrolipoyllysine-residue (2-methylpropanoyl)transferase / Dihydrolipoyl transacylase Genomic Order:  1060
Name:  ? Phvul.003G106700 Secondary Identifier:  ? PAC:37145485
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-5046 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G106700 0.5kb upstream 0.5kb upstream 5590 true Chr03: 26657602-26663191 Phaseolus vulgaris
Phvul.003G106700 0.5kb upstream 0.5kb upstream 500 false Chr03: 26657602-26658101 Phaseolus vulgaris
Phvul.003G106700 0.5kb downstream 0.5kb downstream 5590 true Chr03: 26658102-26663691 Phaseolus vulgaris
Phvul.003G106700 0.5kb downstream 0.5kb downstream 500 false Chr03: 26663192-26663691 Phaseolus vulgaris
Phvul.003G106700 1.0kb upstream 1.0kb upstream 6090 true Chr03: 26657102-26663191 Phaseolus vulgaris
Phvul.003G106700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 26657102-26658101 Phaseolus vulgaris
Phvul.003G106700 1.0kb downstream 1.0kb downstream 6090 true Chr03: 26658102-26664191 Phaseolus vulgaris
Phvul.003G106700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 26663192-26664191 Phaseolus vulgaris
Phvul.003G106700 2.0kb upstream 2.0kb upstream 7090 true Chr03: 26656102-26663191 Phaseolus vulgaris
Phvul.003G106700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 26656102-26658101 Phaseolus vulgaris
Phvul.003G106700 2.0kb downstream 2.0kb downstream 7090 true Chr03: 26658102-26665191 Phaseolus vulgaris
Phvul.003G106700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 26663192-26665191 Phaseolus vulgaris
Phvul.003G106700 5.0kb upstream 5.0kb upstream 10090 true Chr03: 26653102-26663191 Phaseolus vulgaris
Phvul.003G106700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 26653102-26658101 Phaseolus vulgaris
Phvul.003G106700 5.0kb downstream 5.0kb downstream 10090 true Chr03: 26658102-26668191 Phaseolus vulgaris
Phvul.003G106700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 26663192-26668191 Phaseolus vulgaris
Phvul.003G106700 10.0kb upstream 10.0kb upstream 15090 true Chr03: 26648102-26663191 Phaseolus vulgaris
Phvul.003G106700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 26648102-26658101 Phaseolus vulgaris
Phvul.003G106700 10.0kb downstream 10.0kb downstream 15090 true Chr03: 26658102-26673191 Phaseolus vulgaris
Phvul.003G106700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 26663192-26673191 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304967 5265 Fabidae View MSA
124066598 5270 Rosid View MSA
123740917 5271 Pentapetalae View MSA
122788338 5272 Eudicot View MSA
122046167 5273 Angiosperm View MSA
121344663 5274 Embryophyte View MSA
123425518 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 36.3487 0.0 94.5749 High High
cufflinks 21.0447 0.0 54.4926    
cufflinks 10.1885 0.0 27.2604    
cufflinks 16.7148 0.0 43.6824    
cufflinks 11.0783 0.0 29.7099    
cufflinks 6.689 0.0 18.6188    
cufflinks 4.63921 0.0 13.4045   Low
cufflinks 5.42747 0.0 15.327   Low
cufflinks 13.5653 0.0 35.827    
cufflinks 32.7075 0.0 84.7562   High
cufflinks 6.66748 0.0 18.6719    

0 Strain