Gene : Phvul.003G109500 P. vulgaris v2.1
Defline:  (1 of 46) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  1100
Name:  ? Phvul.003G109500 Secondary Identifier:  ? PAC:37144999
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G109500 0.5kb upstream 0.5kb upstream 1239 true Chr03: 27735010-27736248 Phaseolus vulgaris
Phvul.003G109500 0.5kb upstream 0.5kb upstream 500 false Chr03: 27735749-27736248 Phaseolus vulgaris
Phvul.003G109500 0.5kb downstream 0.5kb downstream 1239 true Chr03: 27734510-27735748 Phaseolus vulgaris
Phvul.003G109500 0.5kb downstream 0.5kb downstream 500 false Chr03: 27734510-27735009 Phaseolus vulgaris
Phvul.003G109500 1.0kb upstream 1.0kb upstream 1739 true Chr03: 27735010-27736748 Phaseolus vulgaris
Phvul.003G109500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 27735749-27736748 Phaseolus vulgaris
Phvul.003G109500 1.0kb downstream 1.0kb downstream 1739 true Chr03: 27734010-27735748 Phaseolus vulgaris
Phvul.003G109500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 27734010-27735009 Phaseolus vulgaris
Phvul.003G109500 2.0kb upstream 2.0kb upstream 2739 true Chr03: 27735010-27737748 Phaseolus vulgaris
Phvul.003G109500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 27735749-27737748 Phaseolus vulgaris
Phvul.003G109500 2.0kb downstream 2.0kb downstream 2739 true Chr03: 27733010-27735748 Phaseolus vulgaris
Phvul.003G109500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 27733010-27735009 Phaseolus vulgaris
Phvul.003G109500 5.0kb upstream 5.0kb upstream 5739 true Chr03: 27735010-27740748 Phaseolus vulgaris
Phvul.003G109500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 27735749-27740748 Phaseolus vulgaris
Phvul.003G109500 5.0kb downstream 5.0kb downstream 5739 true Chr03: 27730010-27735748 Phaseolus vulgaris
Phvul.003G109500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 27730010-27735009 Phaseolus vulgaris
Phvul.003G109500 10.0kb upstream 10.0kb upstream 10739 true Chr03: 27735010-27745748 Phaseolus vulgaris
Phvul.003G109500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 27735749-27745748 Phaseolus vulgaris
Phvul.003G109500 10.0kb downstream 10.0kb downstream 10739 true Chr03: 27725010-27735748 Phaseolus vulgaris
Phvul.003G109500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 27725010-27735009 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312983 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 5.50443 0.0 17.6238    
cufflinks 2.18739 0.0 7.80299    
cufflinks 0.109541 0.0 0.507522 Low Low
cufflinks 7.06812 0.0 22.1195   High
cufflinks 0.392042 0.0 1.61223 Low  
cufflinks 0.160405 0.0 0.714625 Low Low
cufflinks 6.02267 0.0 19.1208    
cufflinks 5.3709 0.0 17.3462    
cufflinks 3.24251 0.0 11.0471    
cufflinks 0.271483 0.0 1.15242 Low  
cufflinks 0.517129 0.0 2.07821 Low  

0 Strain