Gene : Phvul.003G109601 P. vulgaris v2.1
Defline:  (1 of 46) PF00407 - Pathogenesis-related protein Bet v I family (Bet_v_1) Genomic Order:  1104
Name:  ? Phvul.003G109601 Secondary Identifier:  ? PAC:37145842
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G109601 0.5kb upstream 0.5kb upstream 1330 true Chr03: 27909993-27911322 Phaseolus vulgaris
Phvul.003G109601 0.5kb upstream 0.5kb upstream 500 false Chr03: 27909993-27910492 Phaseolus vulgaris
Phvul.003G109601 0.5kb downstream 0.5kb downstream 1330 true Chr03: 27910493-27911822 Phaseolus vulgaris
Phvul.003G109601 0.5kb downstream 0.5kb downstream 500 false Chr03: 27911323-27911822 Phaseolus vulgaris
Phvul.003G109601 1.0kb upstream 1.0kb upstream 1830 true Chr03: 27909493-27911322 Phaseolus vulgaris
Phvul.003G109601 1.0kb upstream 1.0kb upstream 1000 false Chr03: 27909493-27910492 Phaseolus vulgaris
Phvul.003G109601 1.0kb downstream 1.0kb downstream 1830 true Chr03: 27910493-27912322 Phaseolus vulgaris
Phvul.003G109601 1.0kb downstream 1.0kb downstream 1000 false Chr03: 27911323-27912322 Phaseolus vulgaris
Phvul.003G109601 2.0kb upstream 2.0kb upstream 2830 true Chr03: 27908493-27911322 Phaseolus vulgaris
Phvul.003G109601 2.0kb upstream 2.0kb upstream 2000 false Chr03: 27908493-27910492 Phaseolus vulgaris
Phvul.003G109601 2.0kb downstream 2.0kb downstream 2830 true Chr03: 27910493-27913322 Phaseolus vulgaris
Phvul.003G109601 2.0kb downstream 2.0kb downstream 2000 false Chr03: 27911323-27913322 Phaseolus vulgaris
Phvul.003G109601 5.0kb upstream 5.0kb upstream 5830 true Chr03: 27905493-27911322 Phaseolus vulgaris
Phvul.003G109601 5.0kb upstream 5.0kb upstream 5000 false Chr03: 27905493-27910492 Phaseolus vulgaris
Phvul.003G109601 5.0kb downstream 5.0kb downstream 5830 true Chr03: 27910493-27916322 Phaseolus vulgaris
Phvul.003G109601 5.0kb downstream 5.0kb downstream 5000 false Chr03: 27911323-27916322 Phaseolus vulgaris
Phvul.003G109601 10.0kb upstream 10.0kb upstream 10830 true Chr03: 27900493-27911322 Phaseolus vulgaris
Phvul.003G109601 10.0kb upstream 10.0kb upstream 10000 false Chr03: 27900493-27910492 Phaseolus vulgaris
Phvul.003G109601 10.0kb downstream 10.0kb downstream 10830 true Chr03: 27910493-27921322 Phaseolus vulgaris
Phvul.003G109601 10.0kb downstream 10.0kb downstream 10000 false Chr03: 27911323-27921322 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312983 5265 Fabidae View MSA
124072279 5270 Rosid View MSA
123752390 5271 Pentapetalae View MSA
122797871 5272 Eudicot View MSA
122048225 5273 Angiosperm View MSA
121351454 5274 Embryophyte View MSA
123382173 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.5592 0.0 56.1483   High
cufflinks 1.95636 0.0 6.91532    
cufflinks 0.128718 0.0 0.574496 Low Low
cufflinks 15.4479 0.0 43.3693    
cufflinks 0.340326 0.0 1.39623 Low  
cufflinks 0.275221 0.0 1.14415 Low  
cufflinks 53.1571 0.0 137.563 High High
cufflinks 13.962 0.0 39.6527    
cufflinks 5.76263 0.0 17.9537    
cufflinks 0.330265 0.0 1.35798    
cufflinks 0.479892 0.0 1.91053 Low  

0 Strain