Gene : Phvul.003G110400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10071:SF203 - GATA TRANSCRIPTION FACTOR 15-RELATED Genomic Order:  1114
Name:  ? Phvul.003G110400 Secondary Identifier:  ? PAC:37146144
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G110400 0.5kb upstream 0.5kb upstream 1588 true Chr03: 28339590-28341177 Phaseolus vulgaris
Phvul.003G110400 0.5kb upstream 0.5kb upstream 500 false Chr03: 28340678-28341177 Phaseolus vulgaris
Phvul.003G110400 0.5kb downstream 0.5kb downstream 1588 true Chr03: 28339090-28340677 Phaseolus vulgaris
Phvul.003G110400 0.5kb downstream 0.5kb downstream 500 false Chr03: 28339090-28339589 Phaseolus vulgaris
Phvul.003G110400 1.0kb upstream 1.0kb upstream 2088 true Chr03: 28339590-28341677 Phaseolus vulgaris
Phvul.003G110400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 28340678-28341677 Phaseolus vulgaris
Phvul.003G110400 1.0kb downstream 1.0kb downstream 2088 true Chr03: 28338590-28340677 Phaseolus vulgaris
Phvul.003G110400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 28338590-28339589 Phaseolus vulgaris
Phvul.003G110400 2.0kb upstream 2.0kb upstream 3088 true Chr03: 28339590-28342677 Phaseolus vulgaris
Phvul.003G110400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 28340678-28342677 Phaseolus vulgaris
Phvul.003G110400 2.0kb downstream 2.0kb downstream 3088 true Chr03: 28337590-28340677 Phaseolus vulgaris
Phvul.003G110400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 28337590-28339589 Phaseolus vulgaris
Phvul.003G110400 5.0kb upstream 5.0kb upstream 6088 true Chr03: 28339590-28345677 Phaseolus vulgaris
Phvul.003G110400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 28340678-28345677 Phaseolus vulgaris
Phvul.003G110400 5.0kb downstream 5.0kb downstream 6088 true Chr03: 28334590-28340677 Phaseolus vulgaris
Phvul.003G110400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 28334590-28339589 Phaseolus vulgaris
Phvul.003G110400 10.0kb upstream 10.0kb upstream 11088 true Chr03: 28339590-28350677 Phaseolus vulgaris
Phvul.003G110400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 28340678-28350677 Phaseolus vulgaris
Phvul.003G110400 10.0kb downstream 10.0kb downstream 11088 true Chr03: 28329590-28340677 Phaseolus vulgaris
Phvul.003G110400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 28329590-28339589 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309084 5265 Fabidae View MSA
124060755 5270 Rosid View MSA
123749447 5271 Pentapetalae View MSA
122796147 5272 Eudicot View MSA
122045626 5273 Angiosperm View MSA
121350500 5274 Embryophyte View MSA
123428177 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 11.6017 0.0 31.8367    
cufflinks 31.7202 0.0 82.1174   High
cufflinks 13.2965 0.0 36.3738    
cufflinks 25.7224 0.0 66.8863   High
cufflinks 23.3168 0.0 61.0326    
cufflinks 12.0326 0.0 32.9949    
cufflinks 12.906 0.0 34.8104    
cufflinks 14.5854 0.0 39.2452    
cufflinks 13.1202 0.0 35.406    
cufflinks 12.9731 0.0 35.3303    
cufflinks 20.435 0.0 53.636    

0 Strain