Gene : Phvul.003G096500 P. vulgaris v2.1
Defline:  (1 of 2) 1.1.1.35//4.2.1.17//4.2.1.55//5.1.2.3//5.3.3.8 - 3-hydroxyacyl-CoA dehydrogenase / Beta-keto-reductase // Enoyl-CoA hydratase / Unsaturated acyl-CoA hydratase // 3-hydroxybutyryl-CoA dehydratase / Crotonase // Dodecenoyl-CoA isomerase / Dodecenoyl-CoA Delta-isomerase Genomic Order:  872
Name:  ? Phvul.003G096500 Secondary Identifier:  ? PAC:37146564
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Sequence Feature Displayer

Ontology Annotation Displayer

11 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ILEUDEG-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-5136 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5137 Phaseolus vulgaris pathologic  
Pvulgaris PWY-5138 Phaseolus vulgaris pathologic  
Pvulgaris PWY-561 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6435 Phaseolus vulgaris pathologic  
Pvulgaris PWY-6837 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7036 Phaseolus vulgaris pathologic  
Pvulgaris PWY-735 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7606 Phaseolus vulgaris pathologic  
Pvulgaris VALDEG-PWY Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G096500 0.5kb upstream 0.5kb upstream 8043 true Chr03: 15415427-15423469 Phaseolus vulgaris
Phvul.003G096500 0.5kb upstream 0.5kb upstream 500 false Chr03: 15422970-15423469 Phaseolus vulgaris
Phvul.003G096500 0.5kb downstream 0.5kb downstream 8043 true Chr03: 15414927-15422969 Phaseolus vulgaris
Phvul.003G096500 0.5kb downstream 0.5kb downstream 500 false Chr03: 15414927-15415426 Phaseolus vulgaris
Phvul.003G096500 1.0kb upstream 1.0kb upstream 8543 true Chr03: 15415427-15423969 Phaseolus vulgaris
Phvul.003G096500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 15422970-15423969 Phaseolus vulgaris
Phvul.003G096500 1.0kb downstream 1.0kb downstream 8543 true Chr03: 15414427-15422969 Phaseolus vulgaris
Phvul.003G096500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 15414427-15415426 Phaseolus vulgaris
Phvul.003G096500 2.0kb upstream 2.0kb upstream 9543 true Chr03: 15415427-15424969 Phaseolus vulgaris
Phvul.003G096500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 15422970-15424969 Phaseolus vulgaris
Phvul.003G096500 2.0kb downstream 2.0kb downstream 9543 true Chr03: 15413427-15422969 Phaseolus vulgaris
Phvul.003G096500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 15413427-15415426 Phaseolus vulgaris
Phvul.003G096500 5.0kb upstream 5.0kb upstream 12543 true Chr03: 15415427-15427969 Phaseolus vulgaris
Phvul.003G096500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 15422970-15427969 Phaseolus vulgaris
Phvul.003G096500 5.0kb downstream 5.0kb downstream 12543 true Chr03: 15410427-15422969 Phaseolus vulgaris
Phvul.003G096500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 15410427-15415426 Phaseolus vulgaris
Phvul.003G096500 10.0kb upstream 10.0kb upstream 17543 true Chr03: 15415427-15432969 Phaseolus vulgaris
Phvul.003G096500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 15422970-15432969 Phaseolus vulgaris
Phvul.003G096500 10.0kb downstream 10.0kb downstream 17543 true Chr03: 15405427-15422969 Phaseolus vulgaris
Phvul.003G096500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 15405427-15415426 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254946 5265 Fabidae View MSA
124061936 5270 Rosid View MSA
123740661 5271 Pentapetalae View MSA
122785876 5272 Eudicot View MSA
122047259 5273 Angiosperm View MSA
121345387 5274 Embryophyte View MSA
123424743 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.43663 0.0 12.4209   Low
cufflinks 12.4381 0.0 32.3569    
cufflinks 12.1523 0.0 31.6186    
cufflinks 11.1619 0.0 29.2835    
cufflinks 10.0177 0.0 26.3895    
cufflinks 10.9825 0.0 28.7104    
cufflinks 5.06894 0.0 14.0446   Low
cufflinks 6.94029 0.0 18.6541    
cufflinks 6.57129 0.0 17.8503    
cufflinks 15.9708 0.0 41.3136   High
cufflinks 8.39412 0.0 22.3626    

0 Strain