Gene : Phvul.003G098500 P. vulgaris v2.1
Defline:  (1 of 3) PTHR31621:SF1 - DUF679 DOMAIN MEMBRANE PROTEIN 1 Genomic Order:  1035
Name:  ? Phvul.003G098500 Secondary Identifier:  ? PAC:37147282
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G098500 0.5kb upstream 0.5kb upstream 1396 true Chr03: 25251903-25253298 Phaseolus vulgaris
Phvul.003G098500 0.5kb upstream 0.5kb upstream 500 false Chr03: 25252799-25253298 Phaseolus vulgaris
Phvul.003G098500 0.5kb downstream 0.5kb downstream 1396 true Chr03: 25251403-25252798 Phaseolus vulgaris
Phvul.003G098500 0.5kb downstream 0.5kb downstream 500 false Chr03: 25251403-25251902 Phaseolus vulgaris
Phvul.003G098500 1.0kb upstream 1.0kb upstream 1896 true Chr03: 25251903-25253798 Phaseolus vulgaris
Phvul.003G098500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 25252799-25253798 Phaseolus vulgaris
Phvul.003G098500 1.0kb downstream 1.0kb downstream 1896 true Chr03: 25250903-25252798 Phaseolus vulgaris
Phvul.003G098500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 25250903-25251902 Phaseolus vulgaris
Phvul.003G098500 2.0kb upstream 2.0kb upstream 2896 true Chr03: 25251903-25254798 Phaseolus vulgaris
Phvul.003G098500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 25252799-25254798 Phaseolus vulgaris
Phvul.003G098500 2.0kb downstream 2.0kb downstream 2896 true Chr03: 25249903-25252798 Phaseolus vulgaris
Phvul.003G098500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 25249903-25251902 Phaseolus vulgaris
Phvul.003G098500 5.0kb upstream 5.0kb upstream 5896 true Chr03: 25251903-25257798 Phaseolus vulgaris
Phvul.003G098500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 25252799-25257798 Phaseolus vulgaris
Phvul.003G098500 5.0kb downstream 5.0kb downstream 5896 true Chr03: 25246903-25252798 Phaseolus vulgaris
Phvul.003G098500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 25246903-25251902 Phaseolus vulgaris
Phvul.003G098500 10.0kb upstream 10.0kb upstream 10896 true Chr03: 25251903-25262798 Phaseolus vulgaris
Phvul.003G098500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 25252799-25262798 Phaseolus vulgaris
Phvul.003G098500 10.0kb downstream 10.0kb downstream 10896 true Chr03: 25241903-25252798 Phaseolus vulgaris
Phvul.003G098500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 25241903-25251902 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122254193 5265 Fabidae View MSA
124066141 5270 Rosid View MSA
123749826 5271 Pentapetalae View MSA
122795559 5272 Eudicot View MSA
122046671 5273 Angiosperm View MSA
121349168 5274 Embryophyte View MSA
123426818 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.180362 0.0 0.775558 Low  
cufflinks 0.169353 0.0 0.733029 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.239428 0.0 1.00069 Low  
cufflinks 0.148157 0.0 0.648909 Low  
cufflinks 0.353411 0.0 1.43617 Low  
cufflinks 0.502058 0.0 1.98229 Low High
cufflinks 0.528793 0.0 2.08153   High
cufflinks 0.0541435 0.0 0.262984 Low Low
cufflinks 0.118556 0.0 0.531634 Low  
cufflinks 0.314764 0.0 1.29012 Low  

0 Strain