Gene : Phvul.003G098800 P. vulgaris v2.1
Genomic Order:  1038 Name:  ? Phvul.003G098800
Secondary Identifier:  ? PAC:37148233
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G098800 0.5kb upstream 0.5kb upstream 3739 true Chr03: 25401626-25405364 Phaseolus vulgaris
Phvul.003G098800 0.5kb upstream 0.5kb upstream 500 false Chr03: 25401626-25402125 Phaseolus vulgaris
Phvul.003G098800 0.5kb downstream 0.5kb downstream 3739 true Chr03: 25402126-25405864 Phaseolus vulgaris
Phvul.003G098800 0.5kb downstream 0.5kb downstream 500 false Chr03: 25405365-25405864 Phaseolus vulgaris
Phvul.003G098800 1.0kb upstream 1.0kb upstream 4239 true Chr03: 25401126-25405364 Phaseolus vulgaris
Phvul.003G098800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 25401126-25402125 Phaseolus vulgaris
Phvul.003G098800 1.0kb downstream 1.0kb downstream 4239 true Chr03: 25402126-25406364 Phaseolus vulgaris
Phvul.003G098800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 25405365-25406364 Phaseolus vulgaris
Phvul.003G098800 2.0kb upstream 2.0kb upstream 5239 true Chr03: 25400126-25405364 Phaseolus vulgaris
Phvul.003G098800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 25400126-25402125 Phaseolus vulgaris
Phvul.003G098800 2.0kb downstream 2.0kb downstream 5239 true Chr03: 25402126-25407364 Phaseolus vulgaris
Phvul.003G098800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 25405365-25407364 Phaseolus vulgaris
Phvul.003G098800 5.0kb upstream 5.0kb upstream 8239 true Chr03: 25397126-25405364 Phaseolus vulgaris
Phvul.003G098800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 25397126-25402125 Phaseolus vulgaris
Phvul.003G098800 5.0kb downstream 5.0kb downstream 8239 true Chr03: 25402126-25410364 Phaseolus vulgaris
Phvul.003G098800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 25405365-25410364 Phaseolus vulgaris
Phvul.003G098800 10.0kb upstream 10.0kb upstream 13239 true Chr03: 25392126-25405364 Phaseolus vulgaris
Phvul.003G098800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 25392126-25402125 Phaseolus vulgaris
Phvul.003G098800 10.0kb downstream 10.0kb downstream 13239 true Chr03: 25402126-25415364 Phaseolus vulgaris
Phvul.003G098800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 25405365-25415364 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122026247 5273 Angiosperm View MSA
122311665 5265 Fabidae View MSA
124062678 5270 Rosid View MSA
123751382 5271 Pentapetalae View MSA
122788871 5272 Eudicot View MSA
121349608 5274 Embryophyte View MSA
123425538 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 41.0803 0.0 106.188 High  
cufflinks 20.3134 0.0 53.9559    
cufflinks 111.766 0.0 301.317 High High
cufflinks 43.2478 0.0 111.809 High  
cufflinks 30.3526 0.0 78.8576    
cufflinks 51.6522 0.0 133.681 High  
cufflinks 15.5574 0.0 41.9981   Low
cufflinks 25.7592 0.0 67.3828    
cufflinks 16.1501 0.0 43.4707   Low
cufflinks 34.549 0.0 89.522    
cufflinks 39.1781 0.0 101.324 High  

0 Strain