Gene : Phvul.003G097500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31307:SF3 - ALCOHOL DEHYDROGENASE TRANSCRIPTION FACTOR MYB/SANT-LIKE PROTEIN Genomic Order:  1051
Name:  ? Phvul.003G097500 Secondary Identifier:  ? PAC:37146460
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G097500 0.5kb upstream 0.5kb upstream 1382 true Chr03: 25960292-25961673 Phaseolus vulgaris
Phvul.003G097500 0.5kb upstream 0.5kb upstream 500 false Chr03: 25961174-25961673 Phaseolus vulgaris
Phvul.003G097500 0.5kb downstream 0.5kb downstream 1382 true Chr03: 25959792-25961173 Phaseolus vulgaris
Phvul.003G097500 0.5kb downstream 0.5kb downstream 500 false Chr03: 25959792-25960291 Phaseolus vulgaris
Phvul.003G097500 1.0kb upstream 1.0kb upstream 1882 true Chr03: 25960292-25962173 Phaseolus vulgaris
Phvul.003G097500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 25961174-25962173 Phaseolus vulgaris
Phvul.003G097500 1.0kb downstream 1.0kb downstream 1882 true Chr03: 25959292-25961173 Phaseolus vulgaris
Phvul.003G097500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 25959292-25960291 Phaseolus vulgaris
Phvul.003G097500 2.0kb upstream 2.0kb upstream 2882 true Chr03: 25960292-25963173 Phaseolus vulgaris
Phvul.003G097500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 25961174-25963173 Phaseolus vulgaris
Phvul.003G097500 2.0kb downstream 2.0kb downstream 2882 true Chr03: 25958292-25961173 Phaseolus vulgaris
Phvul.003G097500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 25958292-25960291 Phaseolus vulgaris
Phvul.003G097500 5.0kb upstream 5.0kb upstream 5882 true Chr03: 25960292-25966173 Phaseolus vulgaris
Phvul.003G097500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 25961174-25966173 Phaseolus vulgaris
Phvul.003G097500 5.0kb downstream 5.0kb downstream 5882 true Chr03: 25955292-25961173 Phaseolus vulgaris
Phvul.003G097500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 25955292-25960291 Phaseolus vulgaris
Phvul.003G097500 10.0kb upstream 10.0kb upstream 10882 true Chr03: 25960292-25971173 Phaseolus vulgaris
Phvul.003G097500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 25961174-25971173 Phaseolus vulgaris
Phvul.003G097500 10.0kb downstream 10.0kb downstream 10882 true Chr03: 25950292-25961173 Phaseolus vulgaris
Phvul.003G097500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 25950292-25960291 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122311907 5265 Fabidae View MSA
124069508 5270 Rosid View MSA
123747324 5271 Pentapetalae View MSA
122790376 5272 Eudicot View MSA
122048588 5273 Angiosperm View MSA
121351505 5274 Embryophyte View MSA
123382195 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 20.8679 0.0 55.3726   Low
cufflinks 34.5882 0.0 90.0111 High  
cufflinks 23.2565 0.0 61.9321   Low
cufflinks 50.6948 0.0 131.14 High  
cufflinks 54.8122 0.0 142.033 High High
cufflinks 40.4641 0.0 104.843 High  
cufflinks 34.2123 0.0 88.8009 High  
cufflinks 27.8371 0.0 73.1342 High  
cufflinks 43.2653 0.0 111.864 High  
cufflinks 33.2605 0.0 86.57    
cufflinks 69.1652 0.0 180.033 High High

0 Strain