Gene : Phvul.003G087000 P. vulgaris v2.1
Defline:  (1 of 3) PTHR11064:SF20 - NUCLEAR TRANSCRIPTION FACTOR Y SUBUNIT B-6-RELATED Genomic Order:  889
Name:  ? Phvul.003G087000 Secondary Identifier:  ? PAC:37144526
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G087000 0.5kb upstream 0.5kb upstream 2875 true Chr03: 16336751-16339625 Phaseolus vulgaris
Phvul.003G087000 0.5kb upstream 0.5kb upstream 500 false Chr03: 16336751-16337250 Phaseolus vulgaris
Phvul.003G087000 0.5kb downstream 0.5kb downstream 2875 true Chr03: 16337251-16340125 Phaseolus vulgaris
Phvul.003G087000 0.5kb downstream 0.5kb downstream 500 false Chr03: 16339626-16340125 Phaseolus vulgaris
Phvul.003G087000 1.0kb upstream 1.0kb upstream 3375 true Chr03: 16336251-16339625 Phaseolus vulgaris
Phvul.003G087000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 16336251-16337250 Phaseolus vulgaris
Phvul.003G087000 1.0kb downstream 1.0kb downstream 3375 true Chr03: 16337251-16340625 Phaseolus vulgaris
Phvul.003G087000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 16339626-16340625 Phaseolus vulgaris
Phvul.003G087000 2.0kb upstream 2.0kb upstream 4375 true Chr03: 16335251-16339625 Phaseolus vulgaris
Phvul.003G087000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 16335251-16337250 Phaseolus vulgaris
Phvul.003G087000 2.0kb downstream 2.0kb downstream 4375 true Chr03: 16337251-16341625 Phaseolus vulgaris
Phvul.003G087000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 16339626-16341625 Phaseolus vulgaris
Phvul.003G087000 5.0kb upstream 5.0kb upstream 7375 true Chr03: 16332251-16339625 Phaseolus vulgaris
Phvul.003G087000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 16332251-16337250 Phaseolus vulgaris
Phvul.003G087000 5.0kb downstream 5.0kb downstream 7375 true Chr03: 16337251-16344625 Phaseolus vulgaris
Phvul.003G087000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 16339626-16344625 Phaseolus vulgaris
Phvul.003G087000 10.0kb upstream 10.0kb upstream 12375 true Chr03: 16327251-16339625 Phaseolus vulgaris
Phvul.003G087000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 16327251-16337250 Phaseolus vulgaris
Phvul.003G087000 10.0kb downstream 10.0kb downstream 12375 true Chr03: 16337251-16349625 Phaseolus vulgaris
Phvul.003G087000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 16339626-16349625 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122309480 5265 Fabidae View MSA
124066588 5270 Rosid View MSA
123751737 5271 Pentapetalae View MSA
122797656 5272 Eudicot View MSA
122048596 5273 Angiosperm View MSA
123429094 5275 Viridiplantae View MSA
121350139 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.336096 0.0 1.33181 Low  
cufflinks 0.676755 0.0 3.1435   High
cufflinks 0.0527213 0.0 0.263935 Low Low
cufflinks 0.552632 0.0 2.59418 Low High
cufflinks 0.163881 0.0 0.701688 Low  
cufflinks 0.359071 0.0 2.75405 Low  
cufflinks 0.0989007 0.0 0.442307 Low  
cufflinks 0.0521206 0.0 0.245582 Low Low
cufflinks 0.0677579 0.0 0.312683 Low Low
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.243453 0.0 0.98742 Low  

0 Strain