Gene : Phvul.003G089200 P. vulgaris v2.1
Defline:  (1 of 3) K02958 - small subunit ribosomal protein S15e (RP-S15e, RPS15) Genomic Order:  914
Name:  ? Phvul.003G089200 Secondary Identifier:  ? PAC:37145505
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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G089200 0.5kb upstream 0.5kb upstream 1569 true Chr03: 17228004-17229572 Phaseolus vulgaris
Phvul.003G089200 0.5kb upstream 0.5kb upstream 500 false Chr03: 17228004-17228503 Phaseolus vulgaris
Phvul.003G089200 0.5kb downstream 0.5kb downstream 1569 true Chr03: 17228504-17230072 Phaseolus vulgaris
Phvul.003G089200 0.5kb downstream 0.5kb downstream 500 false Chr03: 17229573-17230072 Phaseolus vulgaris
Phvul.003G089200 1.0kb upstream 1.0kb upstream 2069 true Chr03: 17227504-17229572 Phaseolus vulgaris
Phvul.003G089200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 17227504-17228503 Phaseolus vulgaris
Phvul.003G089200 1.0kb downstream 1.0kb downstream 2069 true Chr03: 17228504-17230572 Phaseolus vulgaris
Phvul.003G089200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 17229573-17230572 Phaseolus vulgaris
Phvul.003G089200 2.0kb upstream 2.0kb upstream 3069 true Chr03: 17226504-17229572 Phaseolus vulgaris
Phvul.003G089200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 17226504-17228503 Phaseolus vulgaris
Phvul.003G089200 2.0kb downstream 2.0kb downstream 3069 true Chr03: 17228504-17231572 Phaseolus vulgaris
Phvul.003G089200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 17229573-17231572 Phaseolus vulgaris
Phvul.003G089200 5.0kb upstream 5.0kb upstream 6069 true Chr03: 17223504-17229572 Phaseolus vulgaris
Phvul.003G089200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 17223504-17228503 Phaseolus vulgaris
Phvul.003G089200 5.0kb downstream 5.0kb downstream 6069 true Chr03: 17228504-17234572 Phaseolus vulgaris
Phvul.003G089200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 17229573-17234572 Phaseolus vulgaris
Phvul.003G089200 10.0kb upstream 10.0kb upstream 11069 true Chr03: 17218504-17229572 Phaseolus vulgaris
Phvul.003G089200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 17218504-17228503 Phaseolus vulgaris
Phvul.003G089200 10.0kb downstream 10.0kb downstream 11069 true Chr03: 17228504-17239572 Phaseolus vulgaris
Phvul.003G089200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 17229573-17239572 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312187 5265 Fabidae View MSA
124072924 5270 Rosid View MSA
123737007 5271 Pentapetalae View MSA
122786475 5272 Eudicot View MSA
122041885 5273 Angiosperm View MSA
121349053 5274 Embryophyte View MSA
123425446 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 90.9688 0.0 235.969 High  
cufflinks 118.889 0.0 312.388 High  
cufflinks 73.6704 0.0 190.53 High  
cufflinks 151.79 0.0 404.954 High High
cufflinks 106.775 0.0 278.48 High  
cufflinks 71.1623 0.0 183.99 High  
cufflinks 83.9078 0.0 217.625 High  
cufflinks 95.8155 0.0 249.361 High  
cufflinks 128.972 0.0 341.166 High  
cufflinks 42.5431 0.0 110.956 High Low
cufflinks 105.698 0.0 276.058 High  

0 Strain