Gene : Phvul.003G087600 P. vulgaris v2.1
Defline:  (1 of 2) K00626 - acetyl-CoA C-acetyltransferase (E2.3.1.9, atoB) Genomic Order:  923
Name:  ? Phvul.003G087600 Secondary Identifier:  ? PAC:37147432
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Sequence Feature Displayer

Ontology Annotation Displayer

3 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ILEUDEG-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-5910 Phaseolus vulgaris pathologic  
Pvulgaris PWY-922 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G087600 0.5kb upstream 0.5kb upstream 5055 true Chr03: 18830686-18835740 Phaseolus vulgaris
Phvul.003G087600 0.5kb upstream 0.5kb upstream 500 false Chr03: 18835241-18835740 Phaseolus vulgaris
Phvul.003G087600 0.5kb downstream 0.5kb downstream 5055 true Chr03: 18830186-18835240 Phaseolus vulgaris
Phvul.003G087600 0.5kb downstream 0.5kb downstream 500 false Chr03: 18830186-18830685 Phaseolus vulgaris
Phvul.003G087600 1.0kb upstream 1.0kb upstream 5555 true Chr03: 18830686-18836240 Phaseolus vulgaris
Phvul.003G087600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 18835241-18836240 Phaseolus vulgaris
Phvul.003G087600 1.0kb downstream 1.0kb downstream 5555 true Chr03: 18829686-18835240 Phaseolus vulgaris
Phvul.003G087600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 18829686-18830685 Phaseolus vulgaris
Phvul.003G087600 2.0kb upstream 2.0kb upstream 6555 true Chr03: 18830686-18837240 Phaseolus vulgaris
Phvul.003G087600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 18835241-18837240 Phaseolus vulgaris
Phvul.003G087600 2.0kb downstream 2.0kb downstream 6555 true Chr03: 18828686-18835240 Phaseolus vulgaris
Phvul.003G087600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 18828686-18830685 Phaseolus vulgaris
Phvul.003G087600 5.0kb upstream 5.0kb upstream 9555 true Chr03: 18830686-18840240 Phaseolus vulgaris
Phvul.003G087600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 18835241-18840240 Phaseolus vulgaris
Phvul.003G087600 5.0kb downstream 5.0kb downstream 9555 true Chr03: 18825686-18835240 Phaseolus vulgaris
Phvul.003G087600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 18825686-18830685 Phaseolus vulgaris
Phvul.003G087600 10.0kb upstream 10.0kb upstream 14555 true Chr03: 18830686-18845240 Phaseolus vulgaris
Phvul.003G087600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 18835241-18845240 Phaseolus vulgaris
Phvul.003G087600 10.0kb downstream 10.0kb downstream 14555 true Chr03: 18820686-18835240 Phaseolus vulgaris
Phvul.003G087600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 18820686-18830685 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301952 5265 Fabidae View MSA
124066506 5270 Rosid View MSA
123747270 5271 Pentapetalae View MSA
122788364 5272 Eudicot View MSA
122045789 5273 Angiosperm View MSA
121344005 5274 Embryophyte View MSA
123427573 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 54.5528 0.0 161.035 High High
cufflinks 27.1541 0.0 77.4936    
cufflinks 7.47631 0.0 25.0923   Low
cufflinks 20.6569 0.0 61.8461    
cufflinks 22.3571 0.0 72.198    
cufflinks 4.71907 0.0 18.2368   Low
cufflinks 13.8402 0.0 42.0098    
cufflinks 13.1031 0.0 40.1283    
cufflinks 28.2722 0.0 81.2546    
cufflinks 66.6113 0.0 205.098 High High
cufflinks 16.565 0.0 50.749    

0 Strain