Gene : Phvul.003G087700 P. vulgaris v2.1
Defline:  (1 of 16) PF05701 - Weak chloroplast movement under blue light (WEMBL) Genomic Order:  922
Name:  ? Phvul.003G087700 Secondary Identifier:  ? PAC:37147410
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G087700 0.5kb upstream 0.5kb upstream 3206 true Chr03: 18826098-18829303 Phaseolus vulgaris
Phvul.003G087700 0.5kb upstream 0.5kb upstream 500 false Chr03: 18828804-18829303 Phaseolus vulgaris
Phvul.003G087700 0.5kb downstream 0.5kb downstream 3206 true Chr03: 18825598-18828803 Phaseolus vulgaris
Phvul.003G087700 0.5kb downstream 0.5kb downstream 500 false Chr03: 18825598-18826097 Phaseolus vulgaris
Phvul.003G087700 1.0kb upstream 1.0kb upstream 3706 true Chr03: 18826098-18829803 Phaseolus vulgaris
Phvul.003G087700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 18828804-18829803 Phaseolus vulgaris
Phvul.003G087700 1.0kb downstream 1.0kb downstream 3706 true Chr03: 18825098-18828803 Phaseolus vulgaris
Phvul.003G087700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 18825098-18826097 Phaseolus vulgaris
Phvul.003G087700 2.0kb upstream 2.0kb upstream 4706 true Chr03: 18826098-18830803 Phaseolus vulgaris
Phvul.003G087700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 18828804-18830803 Phaseolus vulgaris
Phvul.003G087700 2.0kb downstream 2.0kb downstream 4706 true Chr03: 18824098-18828803 Phaseolus vulgaris
Phvul.003G087700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 18824098-18826097 Phaseolus vulgaris
Phvul.003G087700 5.0kb upstream 5.0kb upstream 7706 true Chr03: 18826098-18833803 Phaseolus vulgaris
Phvul.003G087700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 18828804-18833803 Phaseolus vulgaris
Phvul.003G087700 5.0kb downstream 5.0kb downstream 7706 true Chr03: 18821098-18828803 Phaseolus vulgaris
Phvul.003G087700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 18821098-18826097 Phaseolus vulgaris
Phvul.003G087700 10.0kb upstream 10.0kb upstream 12706 true Chr03: 18826098-18838803 Phaseolus vulgaris
Phvul.003G087700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 18828804-18838803 Phaseolus vulgaris
Phvul.003G087700 10.0kb downstream 10.0kb downstream 12706 true Chr03: 18816098-18828803 Phaseolus vulgaris
Phvul.003G087700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 18816098-18826097 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
121780545 5273 Angiosperm View MSA
122296648 5265 Fabidae View MSA
124035727 5270 Rosid View MSA
123746693 5271 Pentapetalae View MSA
122772010 5272 Eudicot View MSA
121351750 5274 Embryophyte View MSA
123382308 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 6.66437 0.0 17.7489   High
cufflinks 0.0693085 0.0 0.285481 Low  
cufflinks 0.0181023 0.0 0.0845503 Low  
cufflinks 4.58869 0.0 12.6732   High
cufflinks 0.0788808 0.0 0.324637 Low  
cufflinks 0.0267791 0.0 0.120184 Low  
cufflinks 0.0784727 0.0 0.318628 Low  
cufflinks 0.0325977 0.0 0.142735 Low  
cufflinks 0.072481 0.0 0.29616 Low  
cufflinks 0.0517933 0.0 0.219576 Low  
cufflinks 0.0221594 0.0 0.102092 Low  

0 Strain