Gene : Phvul.L001941 P. vulgaris v2.1
Defline:  (1 of 3) K02918 - large subunit ribosomal protein L35e (RP-L35e, RPL35) Genomic Order:  4
Name:  ? Phvul.L001941 Secondary Identifier:  ? PAC:37179042
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2 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.L001941 0.5kb upstream 0.5kb upstream 1847 true scaffold_142: 43423-45269 Phaseolus vulgaris
Phvul.L001941 0.5kb upstream 0.5kb upstream 500 false scaffold_142: 43423-43922 Phaseolus vulgaris
Phvul.L001941 0.5kb downstream 0.5kb downstream 1847 true scaffold_142: 43923-45769 Phaseolus vulgaris
Phvul.L001941 0.5kb downstream 0.5kb downstream 500 false scaffold_142: 45270-45769 Phaseolus vulgaris
Phvul.L001941 1.0kb upstream 1.0kb upstream 2347 true scaffold_142: 42923-45269 Phaseolus vulgaris
Phvul.L001941 1.0kb upstream 1.0kb upstream 1000 false scaffold_142: 42923-43922 Phaseolus vulgaris
Phvul.L001941 1.0kb downstream 1.0kb downstream 2347 true scaffold_142: 43923-46269 Phaseolus vulgaris
Phvul.L001941 1.0kb downstream 1.0kb downstream 1000 false scaffold_142: 45270-46269 Phaseolus vulgaris
Phvul.L001941 2.0kb upstream 2.0kb upstream 3347 true scaffold_142: 41923-45269 Phaseolus vulgaris
Phvul.L001941 2.0kb upstream 2.0kb upstream 2000 false scaffold_142: 41923-43922 Phaseolus vulgaris
Phvul.L001941 2.0kb downstream 2.0kb downstream 3347 true scaffold_142: 43923-47269 Phaseolus vulgaris
Phvul.L001941 2.0kb downstream 2.0kb downstream 2000 false scaffold_142: 45270-47269 Phaseolus vulgaris
Phvul.L001941 5.0kb upstream 5.0kb upstream 6347 true scaffold_142: 38923-45269 Phaseolus vulgaris
Phvul.L001941 5.0kb upstream 5.0kb upstream 5000 false scaffold_142: 38923-43922 Phaseolus vulgaris
Phvul.L001941 5.0kb downstream 5.0kb downstream 6347 true scaffold_142: 43923-50269 Phaseolus vulgaris
Phvul.L001941 5.0kb downstream 5.0kb downstream 5000 false scaffold_142: 45270-50269 Phaseolus vulgaris
Phvul.L001941 10.0kb upstream 10.0kb upstream 11347 true scaffold_142: 33923-45269 Phaseolus vulgaris
Phvul.L001941 10.0kb upstream 10.0kb upstream 10000 false scaffold_142: 33923-43922 Phaseolus vulgaris
Phvul.L001941 10.0kb downstream 10.0kb downstream 7051 true scaffold_142: 43923-50973 Phaseolus vulgaris
Phvul.L001941 10.0kb downstream 10.0kb downstream 5704 false scaffold_142: 45270-50973 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313417 5265 Fabidae View MSA
124074061 5270 Rosid View MSA
123744654 5271 Pentapetalae View MSA
122786708 5272 Eudicot View MSA
122050445 5273 Angiosperm View MSA
121345704 5274 Embryophyte View MSA
123426654 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 85.1887 0.0 221.314 High  
cufflinks 136.604 0.0 364.046 High  
cufflinks 72.6919 0.0 188.126 High  
cufflinks 145.247 0.0 389.568 High High
cufflinks 122.846 0.0 323.749 High  
cufflinks 65.7701 0.0 170.08 High  
cufflinks 93.7563 0.0 245.226 High  
cufflinks 103.374 0.0 271.144 High  
cufflinks 133.639 0.0 357.789 High  
cufflinks 39.6836 0.0 103.526 High Low
cufflinks 119.806 0.0 316.376 High  

0 Strain