Gene : Phvul.003G077700 P. vulgaris v2.1
Defline:  (1 of 4) PTHR24012:SF333 - POLYADENYLATE-BINDING PROTEIN RBP45B-RELATED Genomic Order:  781
Name:  ? Phvul.003G077700 Secondary Identifier:  ? PAC:37145095
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G077700 0.5kb upstream 0.5kb upstream 4911 true Chr03: 12469693-12474603 Phaseolus vulgaris
Phvul.003G077700 0.5kb upstream 0.5kb upstream 500 false Chr03: 12469693-12470192 Phaseolus vulgaris
Phvul.003G077700 0.5kb downstream 0.5kb downstream 4911 true Chr03: 12470193-12475103 Phaseolus vulgaris
Phvul.003G077700 0.5kb downstream 0.5kb downstream 500 false Chr03: 12474604-12475103 Phaseolus vulgaris
Phvul.003G077700 1.0kb upstream 1.0kb upstream 5411 true Chr03: 12469193-12474603 Phaseolus vulgaris
Phvul.003G077700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 12469193-12470192 Phaseolus vulgaris
Phvul.003G077700 1.0kb downstream 1.0kb downstream 5411 true Chr03: 12470193-12475603 Phaseolus vulgaris
Phvul.003G077700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 12474604-12475603 Phaseolus vulgaris
Phvul.003G077700 2.0kb upstream 2.0kb upstream 6411 true Chr03: 12468193-12474603 Phaseolus vulgaris
Phvul.003G077700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 12468193-12470192 Phaseolus vulgaris
Phvul.003G077700 2.0kb downstream 2.0kb downstream 6411 true Chr03: 12470193-12476603 Phaseolus vulgaris
Phvul.003G077700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 12474604-12476603 Phaseolus vulgaris
Phvul.003G077700 5.0kb upstream 5.0kb upstream 9411 true Chr03: 12465193-12474603 Phaseolus vulgaris
Phvul.003G077700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 12465193-12470192 Phaseolus vulgaris
Phvul.003G077700 5.0kb downstream 5.0kb downstream 9411 true Chr03: 12470193-12479603 Phaseolus vulgaris
Phvul.003G077700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 12474604-12479603 Phaseolus vulgaris
Phvul.003G077700 10.0kb upstream 10.0kb upstream 14411 true Chr03: 12460193-12474603 Phaseolus vulgaris
Phvul.003G077700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 12460193-12470192 Phaseolus vulgaris
Phvul.003G077700 10.0kb downstream 10.0kb downstream 14411 true Chr03: 12470193-12484603 Phaseolus vulgaris
Phvul.003G077700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 12474604-12484603 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122314408 5265 Fabidae View MSA
124066893 5270 Rosid View MSA
123742056 5271 Pentapetalae View MSA
122786744 5272 Eudicot View MSA
122051452 5273 Angiosperm View MSA
121351371 5274 Embryophyte View MSA
123424048 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 92.3045 0.0 259.653 High  
cufflinks 87.1991 0.0 243.563 High  
cufflinks 105.011 0.0 299.182 High High
cufflinks 92.7715 0.0 260.625 High  
cufflinks 98.6424 0.0 278.894 High  
cufflinks 67.5861 0.0 184.088 High  
cufflinks 56.286 0.0 151.317 High Low
cufflinks 58.2379 0.0 156.967 High Low
cufflinks 71.4802 0.0 196.218 High  
cufflinks 82.4515 0.0 228.959 High  
cufflinks 105.68 0.0 301.291 High High

0 Strain