Gene : Phvul.003G080800 P. vulgaris v2.1
Defline:  (1 of 1) PTHR13683//PTHR13683:SF364 - ASPARTYL PROTEASES // SUBFAMILY NOT NAMED Genomic Order:  814
Name:  ? Phvul.003G080800 Secondary Identifier:  ? PAC:37148415
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Ontology Annotation Displayer

0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G080800 0.5kb upstream 0.5kb upstream 7129 true Chr03: 13360275-13367403 Phaseolus vulgaris
Phvul.003G080800 0.5kb upstream 0.5kb upstream 500 false Chr03: 13366904-13367403 Phaseolus vulgaris
Phvul.003G080800 0.5kb downstream 0.5kb downstream 7129 true Chr03: 13359775-13366903 Phaseolus vulgaris
Phvul.003G080800 0.5kb downstream 0.5kb downstream 500 false Chr03: 13359775-13360274 Phaseolus vulgaris
Phvul.003G080800 1.0kb upstream 1.0kb upstream 7629 true Chr03: 13360275-13367903 Phaseolus vulgaris
Phvul.003G080800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 13366904-13367903 Phaseolus vulgaris
Phvul.003G080800 1.0kb downstream 1.0kb downstream 7629 true Chr03: 13359275-13366903 Phaseolus vulgaris
Phvul.003G080800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 13359275-13360274 Phaseolus vulgaris
Phvul.003G080800 2.0kb upstream 2.0kb upstream 8629 true Chr03: 13360275-13368903 Phaseolus vulgaris
Phvul.003G080800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 13366904-13368903 Phaseolus vulgaris
Phvul.003G080800 2.0kb downstream 2.0kb downstream 8629 true Chr03: 13358275-13366903 Phaseolus vulgaris
Phvul.003G080800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 13358275-13360274 Phaseolus vulgaris
Phvul.003G080800 5.0kb upstream 5.0kb upstream 11629 true Chr03: 13360275-13371903 Phaseolus vulgaris
Phvul.003G080800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 13366904-13371903 Phaseolus vulgaris
Phvul.003G080800 5.0kb downstream 5.0kb downstream 11629 true Chr03: 13355275-13366903 Phaseolus vulgaris
Phvul.003G080800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 13355275-13360274 Phaseolus vulgaris
Phvul.003G080800 10.0kb upstream 10.0kb upstream 16629 true Chr03: 13360275-13376903 Phaseolus vulgaris
Phvul.003G080800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 13366904-13376903 Phaseolus vulgaris
Phvul.003G080800 10.0kb downstream 10.0kb downstream 16629 true Chr03: 13350275-13366903 Phaseolus vulgaris
Phvul.003G080800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 13350275-13360274 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122795495 5272 Eudicot View MSA
122312580 5265 Fabidae View MSA
124069001 5270 Rosid View MSA
123750418 5271 Pentapetalae View MSA
122045248 5273 Angiosperm View MSA
121346712 5274 Embryophyte View MSA
123428778 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 47.5404 0.0 127.079 High  
cufflinks 30.8613 0.0 80.3693    
cufflinks 16.2 0.0 41.9754    
cufflinks 78.4327 0.0 218.023 High High
cufflinks 27.6186 0.0 71.5907    
cufflinks 38.3342 0.0 100.883 High  
cufflinks 10.5315 0.0 27.8221   Low
cufflinks 24.7126 0.0 63.9934    
cufflinks 9.64503 0.0 25.6756   Low
cufflinks 79.8228 0.0 223.865 High High
cufflinks 49.2084 0.0 131.331 High  

0 Strain