Gene : Phvul.003G080402 P. vulgaris v2.1
Defline:  (1 of 10) PF14476 - Petal formation-expressed (Chloroplast_duf) Genomic Order:  809
Name:  ? Phvul.003G080402 Secondary Identifier:  ? PAC:37145814
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Genomics

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Expression

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0 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G080402 0.5kb upstream 0.5kb upstream 1760 true Chr03: 13200217-13201976 Phaseolus vulgaris
Phvul.003G080402 0.5kb upstream 0.5kb upstream 500 false Chr03: 13201477-13201976 Phaseolus vulgaris
Phvul.003G080402 0.5kb downstream 0.5kb downstream 1760 true Chr03: 13199717-13201476 Phaseolus vulgaris
Phvul.003G080402 0.5kb downstream 0.5kb downstream 500 false Chr03: 13199717-13200216 Phaseolus vulgaris
Phvul.003G080402 1.0kb upstream 1.0kb upstream 2260 true Chr03: 13200217-13202476 Phaseolus vulgaris
Phvul.003G080402 1.0kb upstream 1.0kb upstream 1000 false Chr03: 13201477-13202476 Phaseolus vulgaris
Phvul.003G080402 1.0kb downstream 1.0kb downstream 2260 true Chr03: 13199217-13201476 Phaseolus vulgaris
Phvul.003G080402 1.0kb downstream 1.0kb downstream 1000 false Chr03: 13199217-13200216 Phaseolus vulgaris
Phvul.003G080402 2.0kb upstream 2.0kb upstream 3260 true Chr03: 13200217-13203476 Phaseolus vulgaris
Phvul.003G080402 2.0kb upstream 2.0kb upstream 2000 false Chr03: 13201477-13203476 Phaseolus vulgaris
Phvul.003G080402 2.0kb downstream 2.0kb downstream 3260 true Chr03: 13198217-13201476 Phaseolus vulgaris
Phvul.003G080402 2.0kb downstream 2.0kb downstream 2000 false Chr03: 13198217-13200216 Phaseolus vulgaris
Phvul.003G080402 5.0kb upstream 5.0kb upstream 6260 true Chr03: 13200217-13206476 Phaseolus vulgaris
Phvul.003G080402 5.0kb upstream 5.0kb upstream 5000 false Chr03: 13201477-13206476 Phaseolus vulgaris
Phvul.003G080402 5.0kb downstream 5.0kb downstream 6260 true Chr03: 13195217-13201476 Phaseolus vulgaris
Phvul.003G080402 5.0kb downstream 5.0kb downstream 5000 false Chr03: 13195217-13200216 Phaseolus vulgaris
Phvul.003G080402 10.0kb upstream 10.0kb upstream 11260 true Chr03: 13200217-13211476 Phaseolus vulgaris
Phvul.003G080402 10.0kb upstream 10.0kb upstream 10000 false Chr03: 13201477-13211476 Phaseolus vulgaris
Phvul.003G080402 10.0kb downstream 10.0kb downstream 11260 true Chr03: 13190217-13201476 Phaseolus vulgaris
Phvul.003G080402 10.0kb downstream 10.0kb downstream 10000 false Chr03: 13190217-13200216 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310692 5265 Fabidae View MSA
124072810 5270 Rosid View MSA
123747942 5271 Pentapetalae View MSA
122787872 5272 Eudicot View MSA
122041868 5273 Angiosperm View MSA
121344479 5274 Embryophyte View MSA
123380054 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0291812 0.0 0.143036 Low  
cufflinks 0.0246775 0.0 0.123107 Low  
cufflinks 0.0585035 0.0 0.265911 Low  
cufflinks 0.0112433 0.0 0.061626 Low  
cufflinks 0.0113107 0.0 0.0623839 Low  
cufflinks 0.0528986 0.0 0.243166 Low  
cufflinks 0.518528 0.0 1.95196 Low High
cufflinks 0.377152 0.0 1.45606 Low High
cufflinks 0.0839379 0.0 0.367081 Low  
cufflinks 0.057476 0.0 0.262956 Low  
cufflinks 0.00218828 0.0 0.0186801 Low Low

0 Strain