Gene : Phvul.003G082500 P. vulgaris v2.1
Defline:  (1 of 4) K18045 - tyrosine-protein phosphatase SIW14 [EC:3.1.3.48] (SIW14, OCA3) Genomic Order:  831
Name:  ? Phvul.003G082500 Secondary Identifier:  ? PAC:37145421
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G082500 0.5kb upstream 0.5kb upstream 3727 true Chr03: 13678564-13682290 Phaseolus vulgaris
Phvul.003G082500 0.5kb upstream 0.5kb upstream 500 false Chr03: 13681791-13682290 Phaseolus vulgaris
Phvul.003G082500 0.5kb downstream 0.5kb downstream 3727 true Chr03: 13678064-13681790 Phaseolus vulgaris
Phvul.003G082500 0.5kb downstream 0.5kb downstream 500 false Chr03: 13678064-13678563 Phaseolus vulgaris
Phvul.003G082500 1.0kb upstream 1.0kb upstream 4227 true Chr03: 13678564-13682790 Phaseolus vulgaris
Phvul.003G082500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 13681791-13682790 Phaseolus vulgaris
Phvul.003G082500 1.0kb downstream 1.0kb downstream 4227 true Chr03: 13677564-13681790 Phaseolus vulgaris
Phvul.003G082500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 13677564-13678563 Phaseolus vulgaris
Phvul.003G082500 2.0kb upstream 2.0kb upstream 5227 true Chr03: 13678564-13683790 Phaseolus vulgaris
Phvul.003G082500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 13681791-13683790 Phaseolus vulgaris
Phvul.003G082500 2.0kb downstream 2.0kb downstream 5227 true Chr03: 13676564-13681790 Phaseolus vulgaris
Phvul.003G082500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 13676564-13678563 Phaseolus vulgaris
Phvul.003G082500 5.0kb upstream 5.0kb upstream 8227 true Chr03: 13678564-13686790 Phaseolus vulgaris
Phvul.003G082500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 13681791-13686790 Phaseolus vulgaris
Phvul.003G082500 5.0kb downstream 5.0kb downstream 8227 true Chr03: 13673564-13681790 Phaseolus vulgaris
Phvul.003G082500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 13673564-13678563 Phaseolus vulgaris
Phvul.003G082500 10.0kb upstream 10.0kb upstream 13227 true Chr03: 13678564-13691790 Phaseolus vulgaris
Phvul.003G082500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 13681791-13691790 Phaseolus vulgaris
Phvul.003G082500 10.0kb downstream 10.0kb downstream 13227 true Chr03: 13668564-13681790 Phaseolus vulgaris
Phvul.003G082500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 13668564-13678563 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122296317 5265 Fabidae View MSA
124073099 5270 Rosid View MSA
123742973 5271 Pentapetalae View MSA
122795531 5272 Eudicot View MSA
122050938 5273 Angiosperm View MSA
121344841 5274 Embryophyte View MSA
123380112 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 15.0786 0.0 58.5038   High
cufflinks 5.24481 0.0 24.7083    
cufflinks 3.46006 0.0 30.6016   Low
cufflinks 11.8291 0.0 49.7355   High
cufflinks 7.05056 0.0 28.9912    
cufflinks 4.17132 0.0 20.5009   Low
cufflinks 7.09829 0.0 29.4454    
cufflinks 3.95257 0.0 14.1038   Low
cufflinks 7.54474 0.0 31.439    
cufflinks 6.46048 0.0 44.5243    
cufflinks 9.84566 0.0 50.7412    

0 Strain