Gene : Phvul.003G083000 P. vulgaris v2.1
Defline:  (1 of 1) PTHR10655:SF20 - CARBOXYLESTERASE Genomic Order:  836
Name:  ? Phvul.003G083000 Secondary Identifier:  ? PAC:37148398
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7409 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G083000 0.5kb upstream 0.5kb upstream 5024 true Chr03: 13736772-13741795 Phaseolus vulgaris
Phvul.003G083000 0.5kb upstream 0.5kb upstream 500 false Chr03: 13741296-13741795 Phaseolus vulgaris
Phvul.003G083000 0.5kb downstream 0.5kb downstream 5024 true Chr03: 13736272-13741295 Phaseolus vulgaris
Phvul.003G083000 0.5kb downstream 0.5kb downstream 500 false Chr03: 13736272-13736771 Phaseolus vulgaris
Phvul.003G083000 1.0kb upstream 1.0kb upstream 5524 true Chr03: 13736772-13742295 Phaseolus vulgaris
Phvul.003G083000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 13741296-13742295 Phaseolus vulgaris
Phvul.003G083000 1.0kb downstream 1.0kb downstream 5524 true Chr03: 13735772-13741295 Phaseolus vulgaris
Phvul.003G083000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 13735772-13736771 Phaseolus vulgaris
Phvul.003G083000 2.0kb upstream 2.0kb upstream 6524 true Chr03: 13736772-13743295 Phaseolus vulgaris
Phvul.003G083000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 13741296-13743295 Phaseolus vulgaris
Phvul.003G083000 2.0kb downstream 2.0kb downstream 6524 true Chr03: 13734772-13741295 Phaseolus vulgaris
Phvul.003G083000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 13734772-13736771 Phaseolus vulgaris
Phvul.003G083000 5.0kb upstream 5.0kb upstream 9524 true Chr03: 13736772-13746295 Phaseolus vulgaris
Phvul.003G083000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 13741296-13746295 Phaseolus vulgaris
Phvul.003G083000 5.0kb downstream 5.0kb downstream 9524 true Chr03: 13731772-13741295 Phaseolus vulgaris
Phvul.003G083000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 13731772-13736771 Phaseolus vulgaris
Phvul.003G083000 10.0kb upstream 10.0kb upstream 14524 true Chr03: 13736772-13751295 Phaseolus vulgaris
Phvul.003G083000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 13741296-13751295 Phaseolus vulgaris
Phvul.003G083000 10.0kb downstream 10.0kb downstream 14524 true Chr03: 13726772-13741295 Phaseolus vulgaris
Phvul.003G083000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 13726772-13736771 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306145 5265 Fabidae View MSA
124073611 5270 Rosid View MSA
123748884 5271 Pentapetalae View MSA
122786681 5272 Eudicot View MSA
122044912 5273 Angiosperm View MSA
121349351 5274 Embryophyte View MSA
123428773 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 14.3734 0.0 52.7042    
cufflinks 18.0026 0.0 63.8497    
cufflinks 12.5069 0.0 47.1213    
cufflinks 23.0675 0.0 78.2947   High
cufflinks 14.688 0.0 45.9571    
cufflinks 15.5782 0.0 56.602    
cufflinks 10.7539 0.0 42.2895   Low
cufflinks 13.2676 0.0 49.5602    
cufflinks 15.0898 0.0 55.9072    
cufflinks 13.5129 0.0 50.7446    
cufflinks 15.2389 0.0 56.6057    

0 Strain