Gene : Phvul.003G082900 P. vulgaris v2.1
Genomic Order:  835 Name:  ? Phvul.003G082900
Secondary Identifier:  ? PAC:37148135
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G082900 0.5kb upstream 0.5kb upstream 1366 true Chr03: 13730773-13732138 Phaseolus vulgaris
Phvul.003G082900 0.5kb upstream 0.5kb upstream 500 false Chr03: 13731639-13732138 Phaseolus vulgaris
Phvul.003G082900 0.5kb downstream 0.5kb downstream 1366 true Chr03: 13730273-13731638 Phaseolus vulgaris
Phvul.003G082900 0.5kb downstream 0.5kb downstream 500 false Chr03: 13730273-13730772 Phaseolus vulgaris
Phvul.003G082900 1.0kb upstream 1.0kb upstream 1866 true Chr03: 13730773-13732638 Phaseolus vulgaris
Phvul.003G082900 1.0kb upstream 1.0kb upstream 1000 false Chr03: 13731639-13732638 Phaseolus vulgaris
Phvul.003G082900 1.0kb downstream 1.0kb downstream 1866 true Chr03: 13729773-13731638 Phaseolus vulgaris
Phvul.003G082900 1.0kb downstream 1.0kb downstream 1000 false Chr03: 13729773-13730772 Phaseolus vulgaris
Phvul.003G082900 2.0kb upstream 2.0kb upstream 2866 true Chr03: 13730773-13733638 Phaseolus vulgaris
Phvul.003G082900 2.0kb upstream 2.0kb upstream 2000 false Chr03: 13731639-13733638 Phaseolus vulgaris
Phvul.003G082900 2.0kb downstream 2.0kb downstream 2866 true Chr03: 13728773-13731638 Phaseolus vulgaris
Phvul.003G082900 2.0kb downstream 2.0kb downstream 2000 false Chr03: 13728773-13730772 Phaseolus vulgaris
Phvul.003G082900 5.0kb upstream 5.0kb upstream 5866 true Chr03: 13730773-13736638 Phaseolus vulgaris
Phvul.003G082900 5.0kb upstream 5.0kb upstream 5000 false Chr03: 13731639-13736638 Phaseolus vulgaris
Phvul.003G082900 5.0kb downstream 5.0kb downstream 5866 true Chr03: 13725773-13731638 Phaseolus vulgaris
Phvul.003G082900 5.0kb downstream 5.0kb downstream 5000 false Chr03: 13725773-13730772 Phaseolus vulgaris
Phvul.003G082900 10.0kb upstream 10.0kb upstream 10866 true Chr03: 13730773-13741638 Phaseolus vulgaris
Phvul.003G082900 10.0kb upstream 10.0kb upstream 10000 false Chr03: 13731639-13741638 Phaseolus vulgaris
Phvul.003G082900 10.0kb downstream 10.0kb downstream 10866 true Chr03: 13720773-13731638 Phaseolus vulgaris
Phvul.003G082900 10.0kb downstream 10.0kb downstream 10000 false Chr03: 13720773-13730772 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312157 5265 Fabidae View MSA
124071789 5270 Rosid View MSA
123751715 5271 Pentapetalae View MSA
122793520 5272 Eudicot View MSA
122049689 5273 Angiosperm View MSA
121311543 5274 Embryophyte View MSA
123348826 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.1046 0.0 44.5189    
cufflinks 13.3813 0.0 37.8695    
cufflinks 3.42677 0.0 11.3449   Low
cufflinks 12.9424 0.0 36.0875    
cufflinks 21.123 0.0 57.1891    
cufflinks 12.0598 0.0 34.4752    
cufflinks 33.5865 0.0 87.8627 High High
cufflinks 27.0296 0.0 72.1673    
cufflinks 30.7602 0.0 80.7591 High  
cufflinks 13.1586 0.0 37.3762    
cufflinks 29.0452 0.0 76.7603    

0 Strain