Gene : Phvul.003G069200 P. vulgaris v2.1
Defline:  (1 of 3) 3.2.1.141 - 4-alpha-D-((1->4)-alpha-D-glucano)trehalose trehalohydrolase / Maltooligosyl trehalose trehalohydrolase Genomic Order:  704
Name:  ? Phvul.003G069200 Secondary Identifier:  ? PAC:37144805
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G069200 0.5kb upstream 0.5kb upstream 13297 true Chr03: 10460752-10474048 Phaseolus vulgaris
Phvul.003G069200 0.5kb upstream 0.5kb upstream 500 false Chr03: 10473549-10474048 Phaseolus vulgaris
Phvul.003G069200 0.5kb downstream 0.5kb downstream 13297 true Chr03: 10460252-10473548 Phaseolus vulgaris
Phvul.003G069200 0.5kb downstream 0.5kb downstream 500 false Chr03: 10460252-10460751 Phaseolus vulgaris
Phvul.003G069200 1.0kb upstream 1.0kb upstream 13797 true Chr03: 10460752-10474548 Phaseolus vulgaris
Phvul.003G069200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 10473549-10474548 Phaseolus vulgaris
Phvul.003G069200 1.0kb downstream 1.0kb downstream 13797 true Chr03: 10459752-10473548 Phaseolus vulgaris
Phvul.003G069200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 10459752-10460751 Phaseolus vulgaris
Phvul.003G069200 2.0kb upstream 2.0kb upstream 14797 true Chr03: 10460752-10475548 Phaseolus vulgaris
Phvul.003G069200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 10473549-10475548 Phaseolus vulgaris
Phvul.003G069200 2.0kb downstream 2.0kb downstream 14797 true Chr03: 10458752-10473548 Phaseolus vulgaris
Phvul.003G069200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 10458752-10460751 Phaseolus vulgaris
Phvul.003G069200 5.0kb upstream 5.0kb upstream 17797 true Chr03: 10460752-10478548 Phaseolus vulgaris
Phvul.003G069200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 10473549-10478548 Phaseolus vulgaris
Phvul.003G069200 5.0kb downstream 5.0kb downstream 17797 true Chr03: 10455752-10473548 Phaseolus vulgaris
Phvul.003G069200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 10455752-10460751 Phaseolus vulgaris
Phvul.003G069200 10.0kb upstream 10.0kb upstream 22797 true Chr03: 10460752-10483548 Phaseolus vulgaris
Phvul.003G069200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 10473549-10483548 Phaseolus vulgaris
Phvul.003G069200 10.0kb downstream 10.0kb downstream 22797 true Chr03: 10450752-10473548 Phaseolus vulgaris
Phvul.003G069200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 10450752-10460751 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122041096 5273 Angiosperm View MSA
122302452 5265 Fabidae View MSA
124067208 5270 Rosid View MSA
123738092 5271 Pentapetalae View MSA
122789264 5272 Eudicot View MSA
121348688 5274 Embryophyte View MSA
123427521 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 38.9024 0.0 106.835 High High
cufflinks 10.5297 0.0 27.2615    
cufflinks 25.2593 0.0 66.8677   High
cufflinks 7.11327 0.0 18.7814    
cufflinks 11.187 0.0 28.9775    
cufflinks 12.3151 0.0 31.8332    
cufflinks 4.89384 0.0 13.1998   Low
cufflinks 4.63391 0.0 12.4856   Low
cufflinks 5.1323 0.0 13.817   Low
cufflinks 25.2343 0.0 66.586   High
cufflinks 8.48339 0.0 22.1553    

0 Strain