Gene : Phvul.003G071100 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31205:SF2 - ACTIN CROSS-LINKING PROTEIN Genomic Order:  723
Name:  ? Phvul.003G071100 Secondary Identifier:  ? PAC:37144820
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G071100 0.5kb upstream 0.5kb upstream 6670 true Chr03: 10894433-10901102 Phaseolus vulgaris
Phvul.003G071100 0.5kb upstream 0.5kb upstream 500 false Chr03: 10900603-10901102 Phaseolus vulgaris
Phvul.003G071100 0.5kb downstream 0.5kb downstream 6670 true Chr03: 10893933-10900602 Phaseolus vulgaris
Phvul.003G071100 0.5kb downstream 0.5kb downstream 500 false Chr03: 10893933-10894432 Phaseolus vulgaris
Phvul.003G071100 1.0kb upstream 1.0kb upstream 7170 true Chr03: 10894433-10901602 Phaseolus vulgaris
Phvul.003G071100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 10900603-10901602 Phaseolus vulgaris
Phvul.003G071100 1.0kb downstream 1.0kb downstream 7170 true Chr03: 10893433-10900602 Phaseolus vulgaris
Phvul.003G071100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 10893433-10894432 Phaseolus vulgaris
Phvul.003G071100 2.0kb upstream 2.0kb upstream 8170 true Chr03: 10894433-10902602 Phaseolus vulgaris
Phvul.003G071100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 10900603-10902602 Phaseolus vulgaris
Phvul.003G071100 2.0kb downstream 2.0kb downstream 8170 true Chr03: 10892433-10900602 Phaseolus vulgaris
Phvul.003G071100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 10892433-10894432 Phaseolus vulgaris
Phvul.003G071100 5.0kb upstream 5.0kb upstream 11170 true Chr03: 10894433-10905602 Phaseolus vulgaris
Phvul.003G071100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 10900603-10905602 Phaseolus vulgaris
Phvul.003G071100 5.0kb downstream 5.0kb downstream 11170 true Chr03: 10889433-10900602 Phaseolus vulgaris
Phvul.003G071100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 10889433-10894432 Phaseolus vulgaris
Phvul.003G071100 10.0kb upstream 10.0kb upstream 16170 true Chr03: 10894433-10910602 Phaseolus vulgaris
Phvul.003G071100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 10900603-10910602 Phaseolus vulgaris
Phvul.003G071100 10.0kb downstream 10.0kb downstream 16170 true Chr03: 10884433-10900602 Phaseolus vulgaris
Phvul.003G071100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 10884433-10894432 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301703 5265 Fabidae View MSA
124067257 5270 Rosid View MSA
123752337 5271 Pentapetalae View MSA
122792795 5272 Eudicot View MSA
122046577 5273 Angiosperm View MSA
121350939 5274 Embryophyte View MSA
123381941 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 12.6177 0.0 32.7292    
cufflinks 10.064 0.0 26.3168    
cufflinks 8.46212 0.0 22.436    
cufflinks 12.7353 0.0 33.0263    
cufflinks 9.32857 0.0 24.4647    
cufflinks 8.40502 0.0 22.2056    
cufflinks 12.9702 0.0 33.5668    
cufflinks 11.1939 0.0 29.1442    
cufflinks 14.6689 0.0 37.9224   High
cufflinks 7.17188 0.0 19.1621   Low
cufflinks 9.65684 0.0 25.2403    

0 Strain