Gene : Phvul.003G071700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11214:SF103 - BETA-1,3-GALACTOSYLTRANSFERASE 17-RELATED Genomic Order:  727
Name:  ? Phvul.003G071700 Secondary Identifier:  ? PAC:37146697
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G071700 0.5kb upstream 0.5kb upstream 6834 true Chr03: 10993745-11000578 Phaseolus vulgaris
Phvul.003G071700 0.5kb upstream 0.5kb upstream 500 false Chr03: 11000079-11000578 Phaseolus vulgaris
Phvul.003G071700 0.5kb downstream 0.5kb downstream 6834 true Chr03: 10993245-11000078 Phaseolus vulgaris
Phvul.003G071700 0.5kb downstream 0.5kb downstream 500 false Chr03: 10993245-10993744 Phaseolus vulgaris
Phvul.003G071700 1.0kb upstream 1.0kb upstream 7334 true Chr03: 10993745-11001078 Phaseolus vulgaris
Phvul.003G071700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 11000079-11001078 Phaseolus vulgaris
Phvul.003G071700 1.0kb downstream 1.0kb downstream 7334 true Chr03: 10992745-11000078 Phaseolus vulgaris
Phvul.003G071700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 10992745-10993744 Phaseolus vulgaris
Phvul.003G071700 2.0kb upstream 2.0kb upstream 8334 true Chr03: 10993745-11002078 Phaseolus vulgaris
Phvul.003G071700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 11000079-11002078 Phaseolus vulgaris
Phvul.003G071700 2.0kb downstream 2.0kb downstream 8334 true Chr03: 10991745-11000078 Phaseolus vulgaris
Phvul.003G071700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 10991745-10993744 Phaseolus vulgaris
Phvul.003G071700 5.0kb upstream 5.0kb upstream 11334 true Chr03: 10993745-11005078 Phaseolus vulgaris
Phvul.003G071700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 11000079-11005078 Phaseolus vulgaris
Phvul.003G071700 5.0kb downstream 5.0kb downstream 11334 true Chr03: 10988745-11000078 Phaseolus vulgaris
Phvul.003G071700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 10988745-10993744 Phaseolus vulgaris
Phvul.003G071700 10.0kb upstream 10.0kb upstream 16334 true Chr03: 10993745-11010078 Phaseolus vulgaris
Phvul.003G071700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 11000079-11010078 Phaseolus vulgaris
Phvul.003G071700 10.0kb downstream 10.0kb downstream 16334 true Chr03: 10983745-11000078 Phaseolus vulgaris
Phvul.003G071700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 10983745-10993744 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313000 5265 Fabidae View MSA
124070105 5270 Rosid View MSA
123744575 5271 Pentapetalae View MSA
122795543 5272 Eudicot View MSA
122042506 5273 Angiosperm View MSA
121350326 5274 Embryophyte View MSA
123381679 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.118129 0.0 0.474211 Low Low
cufflinks 0.434796 0.0 1.57156 Low  
cufflinks 1.57063 0.0 4.92977   High
cufflinks 0.741725 0.0 2.5724    
cufflinks 0.730568 0.0 2.52427    
cufflinks 1.73509 0.0 5.38404   High
cufflinks 0.850356 0.0 2.85673    
cufflinks 0.89419 0.0 2.98482    
cufflinks 1.38603 0.0 4.42226    
cufflinks 0.191764 0.0 0.743793 Low Low
cufflinks 0.506419 0.0 1.81075 Low  

0 Strain