Gene : Phvul.003G074400 P. vulgaris v2.1
Defline:  (1 of 1) PTHR36024:SF1 - ANKYRIN REPEAT PROTEIN SKIP35 Genomic Order:  750
Name:  ? Phvul.003G074400 Secondary Identifier:  ? PAC:37145092
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G074400 0.5kb upstream 0.5kb upstream 4129 true Chr03: 11729851-11733979 Phaseolus vulgaris
Phvul.003G074400 0.5kb upstream 0.5kb upstream 500 false Chr03: 11729851-11730350 Phaseolus vulgaris
Phvul.003G074400 0.5kb downstream 0.5kb downstream 4129 true Chr03: 11730351-11734479 Phaseolus vulgaris
Phvul.003G074400 0.5kb downstream 0.5kb downstream 500 false Chr03: 11733980-11734479 Phaseolus vulgaris
Phvul.003G074400 1.0kb upstream 1.0kb upstream 4629 true Chr03: 11729351-11733979 Phaseolus vulgaris
Phvul.003G074400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 11729351-11730350 Phaseolus vulgaris
Phvul.003G074400 1.0kb downstream 1.0kb downstream 4629 true Chr03: 11730351-11734979 Phaseolus vulgaris
Phvul.003G074400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 11733980-11734979 Phaseolus vulgaris
Phvul.003G074400 2.0kb upstream 2.0kb upstream 5629 true Chr03: 11728351-11733979 Phaseolus vulgaris
Phvul.003G074400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 11728351-11730350 Phaseolus vulgaris
Phvul.003G074400 2.0kb downstream 2.0kb downstream 5629 true Chr03: 11730351-11735979 Phaseolus vulgaris
Phvul.003G074400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 11733980-11735979 Phaseolus vulgaris
Phvul.003G074400 5.0kb upstream 5.0kb upstream 8629 true Chr03: 11725351-11733979 Phaseolus vulgaris
Phvul.003G074400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 11725351-11730350 Phaseolus vulgaris
Phvul.003G074400 5.0kb downstream 5.0kb downstream 8629 true Chr03: 11730351-11738979 Phaseolus vulgaris
Phvul.003G074400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 11733980-11738979 Phaseolus vulgaris
Phvul.003G074400 10.0kb upstream 10.0kb upstream 13629 true Chr03: 11720351-11733979 Phaseolus vulgaris
Phvul.003G074400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 11720351-11730350 Phaseolus vulgaris
Phvul.003G074400 10.0kb downstream 10.0kb downstream 13629 true Chr03: 11730351-11743979 Phaseolus vulgaris
Phvul.003G074400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 11733980-11743979 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122299960 5265 Fabidae View MSA
124050252 5270 Rosid View MSA
123738078 5271 Pentapetalae View MSA
122791411 5272 Eudicot View MSA
122050992 5273 Angiosperm View MSA
121347719 5274 Embryophyte View MSA
123380606 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 19.1691 0.0 49.5897    
cufflinks 19.4424 0.0 50.3199    
cufflinks 27.2146 0.0 71.2108   High
cufflinks 15.4637 0.0 40.0231   Low
cufflinks 21.379 0.0 55.3931    
cufflinks 23.538 0.0 61.1997    
cufflinks 22.4993 0.0 58.4271    
cufflinks 21.831 0.0 56.6832    
cufflinks 20.4957 0.0 53.0687    
cufflinks 29.4762 0.0 77.3578   High
cufflinks 21.6478 0.0 56.1061    

0 Strain