Gene : Phvul.003G059000 P. vulgaris v2.1
Defline:  (1 of 2) PTHR23213//PTHR23213:SF220 - FORMIN-RELATED // SUBFAMILY NOT NAMED Genomic Order:  608
Name:  ? Phvul.003G059000 Secondary Identifier:  ? PAC:37146838
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G059000 0.5kb upstream 0.5kb upstream 5309 true Chr03: 8032646-8037954 Phaseolus vulgaris
Phvul.003G059000 0.5kb upstream 0.5kb upstream 500 false Chr03: 8037455-8037954 Phaseolus vulgaris
Phvul.003G059000 0.5kb downstream 0.5kb downstream 5309 true Chr03: 8032146-8037454 Phaseolus vulgaris
Phvul.003G059000 0.5kb downstream 0.5kb downstream 500 false Chr03: 8032146-8032645 Phaseolus vulgaris
Phvul.003G059000 1.0kb upstream 1.0kb upstream 5809 true Chr03: 8032646-8038454 Phaseolus vulgaris
Phvul.003G059000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 8037455-8038454 Phaseolus vulgaris
Phvul.003G059000 1.0kb downstream 1.0kb downstream 5809 true Chr03: 8031646-8037454 Phaseolus vulgaris
Phvul.003G059000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 8031646-8032645 Phaseolus vulgaris
Phvul.003G059000 2.0kb upstream 2.0kb upstream 6809 true Chr03: 8032646-8039454 Phaseolus vulgaris
Phvul.003G059000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 8037455-8039454 Phaseolus vulgaris
Phvul.003G059000 2.0kb downstream 2.0kb downstream 6809 true Chr03: 8030646-8037454 Phaseolus vulgaris
Phvul.003G059000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 8030646-8032645 Phaseolus vulgaris
Phvul.003G059000 5.0kb upstream 5.0kb upstream 9809 true Chr03: 8032646-8042454 Phaseolus vulgaris
Phvul.003G059000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 8037455-8042454 Phaseolus vulgaris
Phvul.003G059000 5.0kb downstream 5.0kb downstream 9809 true Chr03: 8027646-8037454 Phaseolus vulgaris
Phvul.003G059000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 8027646-8032645 Phaseolus vulgaris
Phvul.003G059000 10.0kb upstream 10.0kb upstream 14809 true Chr03: 8032646-8047454 Phaseolus vulgaris
Phvul.003G059000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 8037455-8047454 Phaseolus vulgaris
Phvul.003G059000 10.0kb downstream 10.0kb downstream 14809 true Chr03: 8022646-8037454 Phaseolus vulgaris
Phvul.003G059000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 8022646-8032645 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122312273 5265 Fabidae View MSA
124073350 5270 Rosid View MSA
123751322 5271 Pentapetalae View MSA
122795488 5272 Eudicot View MSA
122050252 5273 Angiosperm View MSA
121351212 5274 Embryophyte View MSA
123428124 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 3.59212 0.0 11.9841    
cufflinks 21.0502 0.0 67.4759   High
cufflinks 3.15562 0.0 10.7805    
cufflinks 3.19817 0.0 12.7518    
cufflinks 3.43911 0.0 11.5693    
cufflinks 4.76275 0.0 15.1912    
cufflinks 1.26218 0.0 5.75768   Low
cufflinks 2.8282 0.0 10.0079    
cufflinks 0.771549 0.0 2.9998   Low
cufflinks 15.9151 0.0 50.8499   High
cufflinks 4.21828 0.0 13.6191    

0 Strain