Gene : Phvul.003G062800 P. vulgaris v2.1
Defline:  (1 of 3) K02575 - MFS transporter, NNP family, nitrate/nitrite transporter (NRT, narK, nrtP, nasA) Genomic Order:  646
Name:  ? Phvul.003G062800 Secondary Identifier:  ? PAC:37146696
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G062800 0.5kb upstream 0.5kb upstream 3269 true Chr03: 8804138-8807406 Phaseolus vulgaris
Phvul.003G062800 0.5kb upstream 0.5kb upstream 500 false Chr03: 8806907-8807406 Phaseolus vulgaris
Phvul.003G062800 0.5kb downstream 0.5kb downstream 3269 true Chr03: 8803638-8806906 Phaseolus vulgaris
Phvul.003G062800 0.5kb downstream 0.5kb downstream 500 false Chr03: 8803638-8804137 Phaseolus vulgaris
Phvul.003G062800 1.0kb upstream 1.0kb upstream 3769 true Chr03: 8804138-8807906 Phaseolus vulgaris
Phvul.003G062800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 8806907-8807906 Phaseolus vulgaris
Phvul.003G062800 1.0kb downstream 1.0kb downstream 3769 true Chr03: 8803138-8806906 Phaseolus vulgaris
Phvul.003G062800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 8803138-8804137 Phaseolus vulgaris
Phvul.003G062800 2.0kb upstream 2.0kb upstream 4769 true Chr03: 8804138-8808906 Phaseolus vulgaris
Phvul.003G062800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 8806907-8808906 Phaseolus vulgaris
Phvul.003G062800 2.0kb downstream 2.0kb downstream 4769 true Chr03: 8802138-8806906 Phaseolus vulgaris
Phvul.003G062800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 8802138-8804137 Phaseolus vulgaris
Phvul.003G062800 5.0kb upstream 5.0kb upstream 7769 true Chr03: 8804138-8811906 Phaseolus vulgaris
Phvul.003G062800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 8806907-8811906 Phaseolus vulgaris
Phvul.003G062800 5.0kb downstream 5.0kb downstream 7769 true Chr03: 8799138-8806906 Phaseolus vulgaris
Phvul.003G062800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 8799138-8804137 Phaseolus vulgaris
Phvul.003G062800 10.0kb upstream 10.0kb upstream 12769 true Chr03: 8804138-8816906 Phaseolus vulgaris
Phvul.003G062800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 8806907-8816906 Phaseolus vulgaris
Phvul.003G062800 10.0kb downstream 10.0kb downstream 12769 true Chr03: 8794138-8806906 Phaseolus vulgaris
Phvul.003G062800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 8794138-8804137 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301071 5265 Fabidae View MSA
124062413 5270 Rosid View MSA
123749951 5271 Pentapetalae View MSA
122791136 5272 Eudicot View MSA
122049482 5273 Angiosperm View MSA
121311428 5274 Embryophyte View MSA
123426832 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 4.62739 0.0 13.2624    
cufflinks 1.11591 0.0 3.75133    
cufflinks 0.812455 0.0 2.82276    
cufflinks 8.77377 0.0 23.7844    
cufflinks 0.42452 0.0 1.57248 Low Low
cufflinks 6.2337 0.0 17.3351    
cufflinks 14.3261 0.0 37.4013   High
cufflinks 28.576 0.0 74.0337 High High
cufflinks 0.639193 0.0 2.28216    
cufflinks 0.322722 0.0 1.22358   Low
cufflinks 5.81221 0.0 16.2938    

0 Strain