Gene : Phvul.003G062400 P. vulgaris v2.1
Defline:  (1 of 2) PTHR32285:SF4 - PROTEIN TRICHOME BIREFRINGENCE-LIKE 2 Genomic Order:  642
Name:  ? Phvul.003G062400 Secondary Identifier:  ? PAC:37144333
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G062400 0.5kb upstream 0.5kb upstream 3476 true Chr03: 8685303-8688778 Phaseolus vulgaris
Phvul.003G062400 0.5kb upstream 0.5kb upstream 500 false Chr03: 8685303-8685802 Phaseolus vulgaris
Phvul.003G062400 0.5kb downstream 0.5kb downstream 3476 true Chr03: 8685803-8689278 Phaseolus vulgaris
Phvul.003G062400 0.5kb downstream 0.5kb downstream 500 false Chr03: 8688779-8689278 Phaseolus vulgaris
Phvul.003G062400 1.0kb upstream 1.0kb upstream 3976 true Chr03: 8684803-8688778 Phaseolus vulgaris
Phvul.003G062400 1.0kb upstream 1.0kb upstream 1000 false Chr03: 8684803-8685802 Phaseolus vulgaris
Phvul.003G062400 1.0kb downstream 1.0kb downstream 3976 true Chr03: 8685803-8689778 Phaseolus vulgaris
Phvul.003G062400 1.0kb downstream 1.0kb downstream 1000 false Chr03: 8688779-8689778 Phaseolus vulgaris
Phvul.003G062400 2.0kb upstream 2.0kb upstream 4976 true Chr03: 8683803-8688778 Phaseolus vulgaris
Phvul.003G062400 2.0kb upstream 2.0kb upstream 2000 false Chr03: 8683803-8685802 Phaseolus vulgaris
Phvul.003G062400 2.0kb downstream 2.0kb downstream 4976 true Chr03: 8685803-8690778 Phaseolus vulgaris
Phvul.003G062400 2.0kb downstream 2.0kb downstream 2000 false Chr03: 8688779-8690778 Phaseolus vulgaris
Phvul.003G062400 5.0kb upstream 5.0kb upstream 7976 true Chr03: 8680803-8688778 Phaseolus vulgaris
Phvul.003G062400 5.0kb upstream 5.0kb upstream 5000 false Chr03: 8680803-8685802 Phaseolus vulgaris
Phvul.003G062400 5.0kb downstream 5.0kb downstream 7976 true Chr03: 8685803-8693778 Phaseolus vulgaris
Phvul.003G062400 5.0kb downstream 5.0kb downstream 5000 false Chr03: 8688779-8693778 Phaseolus vulgaris
Phvul.003G062400 10.0kb upstream 10.0kb upstream 12976 true Chr03: 8675803-8688778 Phaseolus vulgaris
Phvul.003G062400 10.0kb upstream 10.0kb upstream 10000 false Chr03: 8675803-8685802 Phaseolus vulgaris
Phvul.003G062400 10.0kb downstream 10.0kb downstream 12976 true Chr03: 8685803-8698778 Phaseolus vulgaris
Phvul.003G062400 10.0kb downstream 10.0kb downstream 10000 false Chr03: 8688779-8698778 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122310953 5265 Fabidae View MSA
124060625 5270 Rosid View MSA
123752142 5271 Pentapetalae View MSA
122792748 5272 Eudicot View MSA
122050805 5273 Angiosperm View MSA
123428901 5275 Viridiplantae View MSA
121350671 5274 Embryophyte View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.018681 0.0 0.0925831 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.034536 0.0 0.162166 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.062659 0.0 0.274108 Low  
cufflinks 0.161037 0.0 0.645917 Low High
cufflinks 0.0468116 0.0 0.211518 Low  
cufflinks 0.0100196 0.0 0.053594 Low Low
cufflinks 0.0199452 0.0 0.0989489 Low  

0 Strain