Gene : Phvul.003G051500 P. vulgaris v2.1
Defline:  (1 of 1) K13110 - microfibrillar-associated protein 1 (MFAP1) Genomic Order:  527
Name:  ? Phvul.003G051500 Secondary Identifier:  ? PAC:37145331
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G051500 0.5kb upstream 0.5kb upstream 7333 true Chr03: 6509650-6516982 Phaseolus vulgaris
Phvul.003G051500 0.5kb upstream 0.5kb upstream 500 false Chr03: 6516483-6516982 Phaseolus vulgaris
Phvul.003G051500 0.5kb downstream 0.5kb downstream 7333 true Chr03: 6509150-6516482 Phaseolus vulgaris
Phvul.003G051500 0.5kb downstream 0.5kb downstream 500 false Chr03: 6509150-6509649 Phaseolus vulgaris
Phvul.003G051500 1.0kb upstream 1.0kb upstream 7833 true Chr03: 6509650-6517482 Phaseolus vulgaris
Phvul.003G051500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 6516483-6517482 Phaseolus vulgaris
Phvul.003G051500 1.0kb downstream 1.0kb downstream 7833 true Chr03: 6508650-6516482 Phaseolus vulgaris
Phvul.003G051500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 6508650-6509649 Phaseolus vulgaris
Phvul.003G051500 2.0kb upstream 2.0kb upstream 8833 true Chr03: 6509650-6518482 Phaseolus vulgaris
Phvul.003G051500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 6516483-6518482 Phaseolus vulgaris
Phvul.003G051500 2.0kb downstream 2.0kb downstream 8833 true Chr03: 6507650-6516482 Phaseolus vulgaris
Phvul.003G051500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 6507650-6509649 Phaseolus vulgaris
Phvul.003G051500 5.0kb upstream 5.0kb upstream 11833 true Chr03: 6509650-6521482 Phaseolus vulgaris
Phvul.003G051500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 6516483-6521482 Phaseolus vulgaris
Phvul.003G051500 5.0kb downstream 5.0kb downstream 11833 true Chr03: 6504650-6516482 Phaseolus vulgaris
Phvul.003G051500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 6504650-6509649 Phaseolus vulgaris
Phvul.003G051500 10.0kb upstream 10.0kb upstream 16833 true Chr03: 6509650-6526482 Phaseolus vulgaris
Phvul.003G051500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 6516483-6526482 Phaseolus vulgaris
Phvul.003G051500 10.0kb downstream 10.0kb downstream 16833 true Chr03: 6499650-6516482 Phaseolus vulgaris
Phvul.003G051500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 6499650-6509649 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302407 5265 Fabidae View MSA
124067088 5270 Rosid View MSA
123736689 5271 Pentapetalae View MSA
122786244 5272 Eudicot View MSA
122047677 5273 Angiosperm View MSA
121344140 5274 Embryophyte View MSA
123423815 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 13.5534 0.0 35.0491    
cufflinks 16.119 0.0 41.6795    
cufflinks 11.6916 0.0 30.2882   Low
cufflinks 9.16196 0.0 24.112   Low
cufflinks 14.9122 0.0 38.5639    
cufflinks 12.9834 0.0 33.5753    
cufflinks 15.1412 0.0 39.1535    
cufflinks 14.9182 0.0 38.5706    
cufflinks 17.363 0.0 44.9644    
cufflinks 18.559 0.0 48.0518   High
cufflinks 15.4941 0.0 40.0498    

0 Strain