Gene : Phvul.003G054500 P. vulgaris v2.1
Defline:  (1 of 2) PTHR11119:SF50 - NUCLEOBASE-ASCORBATE TRANSPORTER 7-RELATED Genomic Order:  562
Name:  ? Phvul.003G054500 Secondary Identifier:  ? PAC:37144979
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G054500 0.5kb upstream 0.5kb upstream 4678 true Chr03: 7111969-7116646 Phaseolus vulgaris
Phvul.003G054500 0.5kb upstream 0.5kb upstream 500 false Chr03: 7111969-7112468 Phaseolus vulgaris
Phvul.003G054500 0.5kb downstream 0.5kb downstream 4678 true Chr03: 7112469-7117146 Phaseolus vulgaris
Phvul.003G054500 0.5kb downstream 0.5kb downstream 500 false Chr03: 7116647-7117146 Phaseolus vulgaris
Phvul.003G054500 1.0kb upstream 1.0kb upstream 5178 true Chr03: 7111469-7116646 Phaseolus vulgaris
Phvul.003G054500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 7111469-7112468 Phaseolus vulgaris
Phvul.003G054500 1.0kb downstream 1.0kb downstream 5178 true Chr03: 7112469-7117646 Phaseolus vulgaris
Phvul.003G054500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 7116647-7117646 Phaseolus vulgaris
Phvul.003G054500 2.0kb upstream 2.0kb upstream 6178 true Chr03: 7110469-7116646 Phaseolus vulgaris
Phvul.003G054500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 7110469-7112468 Phaseolus vulgaris
Phvul.003G054500 2.0kb downstream 2.0kb downstream 6178 true Chr03: 7112469-7118646 Phaseolus vulgaris
Phvul.003G054500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 7116647-7118646 Phaseolus vulgaris
Phvul.003G054500 5.0kb upstream 5.0kb upstream 9178 true Chr03: 7107469-7116646 Phaseolus vulgaris
Phvul.003G054500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 7107469-7112468 Phaseolus vulgaris
Phvul.003G054500 5.0kb downstream 5.0kb downstream 9178 true Chr03: 7112469-7121646 Phaseolus vulgaris
Phvul.003G054500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 7116647-7121646 Phaseolus vulgaris
Phvul.003G054500 10.0kb upstream 10.0kb upstream 14178 true Chr03: 7102469-7116646 Phaseolus vulgaris
Phvul.003G054500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 7102469-7112468 Phaseolus vulgaris
Phvul.003G054500 10.0kb downstream 10.0kb downstream 14178 true Chr03: 7112469-7126646 Phaseolus vulgaris
Phvul.003G054500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 7116647-7126646 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301875 5265 Fabidae View MSA
124072472 5270 Rosid View MSA
123738745 5271 Pentapetalae View MSA
122794781 5272 Eudicot View MSA
122049429 5273 Angiosperm View MSA
121311395 5274 Embryophyte View MSA
123428829 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.181002 0.0 0.715327 Low  
cufflinks 1.15295 0.0 3.84539    
cufflinks 0.938742 0.0 3.19231    
cufflinks 0.291181 0.0 1.11509 Low  
cufflinks 2.07371 0.0 6.49482    
cufflinks 2.50858 0.0 7.65481    
cufflinks 3.92956 0.0 11.4048    
cufflinks 2.23728 0.0 6.90383    
cufflinks 3.24593 0.0 9.6595    
cufflinks 0.017224 0.0 0.0850182 Low Low
cufflinks 2.15048 0.0 6.71188    

0 Strain