Gene : Phvul.003G053000 P. vulgaris v2.1
Defline:  (1 of 9) 2.4.1.15//3.1.3.12 - Alpha,alpha-trehalose-phosphate synthase (UDP-forming) / UDP-glucose--glucose-phosphate glucosyltransferase // Trehalose-phosphatase / Trehalose 6-phosphate phosphatase Genomic Order:  544
Name:  ? Phvul.003G053000 Secondary Identifier:  ? PAC:37146124
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G053000 0.5kb upstream 0.5kb upstream 5508 true Chr03: 6833359-6838866 Phaseolus vulgaris
Phvul.003G053000 0.5kb upstream 0.5kb upstream 500 false Chr03: 6833359-6833858 Phaseolus vulgaris
Phvul.003G053000 0.5kb downstream 0.5kb downstream 5508 true Chr03: 6833859-6839366 Phaseolus vulgaris
Phvul.003G053000 0.5kb downstream 0.5kb downstream 500 false Chr03: 6838867-6839366 Phaseolus vulgaris
Phvul.003G053000 1.0kb upstream 1.0kb upstream 6008 true Chr03: 6832859-6838866 Phaseolus vulgaris
Phvul.003G053000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 6832859-6833858 Phaseolus vulgaris
Phvul.003G053000 1.0kb downstream 1.0kb downstream 6008 true Chr03: 6833859-6839866 Phaseolus vulgaris
Phvul.003G053000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 6838867-6839866 Phaseolus vulgaris
Phvul.003G053000 2.0kb upstream 2.0kb upstream 7008 true Chr03: 6831859-6838866 Phaseolus vulgaris
Phvul.003G053000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 6831859-6833858 Phaseolus vulgaris
Phvul.003G053000 2.0kb downstream 2.0kb downstream 7008 true Chr03: 6833859-6840866 Phaseolus vulgaris
Phvul.003G053000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 6838867-6840866 Phaseolus vulgaris
Phvul.003G053000 5.0kb upstream 5.0kb upstream 10008 true Chr03: 6828859-6838866 Phaseolus vulgaris
Phvul.003G053000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 6828859-6833858 Phaseolus vulgaris
Phvul.003G053000 5.0kb downstream 5.0kb downstream 10008 true Chr03: 6833859-6843866 Phaseolus vulgaris
Phvul.003G053000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 6838867-6843866 Phaseolus vulgaris
Phvul.003G053000 10.0kb upstream 10.0kb upstream 15008 true Chr03: 6823859-6838866 Phaseolus vulgaris
Phvul.003G053000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 6823859-6833858 Phaseolus vulgaris
Phvul.003G053000 10.0kb downstream 10.0kb downstream 15008 true Chr03: 6833859-6848866 Phaseolus vulgaris
Phvul.003G053000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 6838867-6848866 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122300969 5265 Fabidae View MSA
124066120 5270 Rosid View MSA
123744946 5271 Pentapetalae View MSA
122786630 5272 Eudicot View MSA
122050355 5273 Angiosperm View MSA
121311868 5274 Embryophyte View MSA
123425695 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 16.9967 0.0 43.9917    
cufflinks 11.29 0.0 29.2653    
cufflinks 11.3775 0.0 29.4673    
cufflinks 8.83424 0.0 23.1918    
cufflinks 12.332 0.0 31.9519    
cufflinks 7.50468 0.0 19.7885    
cufflinks 6.78553 0.0 18.0534    
cufflinks 2.65823 0.0 7.63565   Low
cufflinks 21.2814 0.0 55.2617   High
cufflinks 17.2754 0.0 44.7088    
cufflinks 6.70213 0.0 17.898    

0 Strain