Gene : Phvul.003G058200 P. vulgaris v2.1
Genomic Order:  600 Name:  ? Phvul.003G058200
Secondary Identifier:  ? PAC:37146837
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G058200 0.5kb upstream 0.5kb upstream 4160 true Chr03: 7906778-7910937 Phaseolus vulgaris
Phvul.003G058200 0.5kb upstream 0.5kb upstream 500 false Chr03: 7906778-7907277 Phaseolus vulgaris
Phvul.003G058200 0.5kb downstream 0.5kb downstream 4160 true Chr03: 7907278-7911437 Phaseolus vulgaris
Phvul.003G058200 0.5kb downstream 0.5kb downstream 500 false Chr03: 7910938-7911437 Phaseolus vulgaris
Phvul.003G058200 1.0kb upstream 1.0kb upstream 4660 true Chr03: 7906278-7910937 Phaseolus vulgaris
Phvul.003G058200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 7906278-7907277 Phaseolus vulgaris
Phvul.003G058200 1.0kb downstream 1.0kb downstream 4660 true Chr03: 7907278-7911937 Phaseolus vulgaris
Phvul.003G058200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 7910938-7911937 Phaseolus vulgaris
Phvul.003G058200 2.0kb upstream 2.0kb upstream 5660 true Chr03: 7905278-7910937 Phaseolus vulgaris
Phvul.003G058200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 7905278-7907277 Phaseolus vulgaris
Phvul.003G058200 2.0kb downstream 2.0kb downstream 5660 true Chr03: 7907278-7912937 Phaseolus vulgaris
Phvul.003G058200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 7910938-7912937 Phaseolus vulgaris
Phvul.003G058200 5.0kb upstream 5.0kb upstream 8660 true Chr03: 7902278-7910937 Phaseolus vulgaris
Phvul.003G058200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 7902278-7907277 Phaseolus vulgaris
Phvul.003G058200 5.0kb downstream 5.0kb downstream 8660 true Chr03: 7907278-7915937 Phaseolus vulgaris
Phvul.003G058200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 7910938-7915937 Phaseolus vulgaris
Phvul.003G058200 10.0kb upstream 10.0kb upstream 13660 true Chr03: 7897278-7910937 Phaseolus vulgaris
Phvul.003G058200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 7897278-7907277 Phaseolus vulgaris
Phvul.003G058200 10.0kb downstream 10.0kb downstream 13660 true Chr03: 7907278-7920937 Phaseolus vulgaris
Phvul.003G058200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 7910938-7920937 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122040940 5273 Angiosperm View MSA
122308885 5265 Fabidae View MSA
124067183 5270 Rosid View MSA
123746963 5271 Pentapetalae View MSA
122786098 5272 Eudicot View MSA
121309774 5274 Embryophyte View MSA
123427495 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.00374 0.0 18.487   Low
cufflinks 33.4629 0.0 89.7482 High High
cufflinks 38.1691 0.0 103.01   High
cufflinks 20.4013 0.0 53.1419    
cufflinks 8.04812 0.0 21.0771    
cufflinks 46.4765 0.0 128.354 High High
cufflinks 9.80776 0.0 25.4212    
cufflinks 20.2523 0.0 52.7223    
cufflinks 6.23258 0.0 16.5001   Low
cufflinks 9.33241 0.0 24.2815    
cufflinks 8.97451 0.0 23.3439    

0 Strain