Gene : Phvul.003G044200 P. vulgaris v2.1
Defline:  (1 of 4) 4.1.1.50 - Adenosylmethionine decarboxylase / S-adenosyl-L-methionine decarboxylase Genomic Order:  450
Name:  ? Phvul.003G044200 Secondary Identifier:  ? PAC:37148102
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

4 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris ARGSPECAT-PWY Phaseolus vulgaris pathologic  
Pvulgaris BSUBPOLYAMSYN-PWY Phaseolus vulgaris pathologic  
Pvulgaris POLYAMINSYN3-PWY Phaseolus vulgaris pathologic  
Pvulgaris PWY-7528 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G044200 0.5kb upstream 0.5kb upstream 3531 true Chr03: 5161791-5165321 Phaseolus vulgaris
Phvul.003G044200 0.5kb upstream 0.5kb upstream 500 false Chr03: 5161791-5162290 Phaseolus vulgaris
Phvul.003G044200 0.5kb downstream 0.5kb downstream 3531 true Chr03: 5162291-5165821 Phaseolus vulgaris
Phvul.003G044200 0.5kb downstream 0.5kb downstream 500 false Chr03: 5165322-5165821 Phaseolus vulgaris
Phvul.003G044200 1.0kb upstream 1.0kb upstream 4031 true Chr03: 5161291-5165321 Phaseolus vulgaris
Phvul.003G044200 1.0kb upstream 1.0kb upstream 1000 false Chr03: 5161291-5162290 Phaseolus vulgaris
Phvul.003G044200 1.0kb downstream 1.0kb downstream 4031 true Chr03: 5162291-5166321 Phaseolus vulgaris
Phvul.003G044200 1.0kb downstream 1.0kb downstream 1000 false Chr03: 5165322-5166321 Phaseolus vulgaris
Phvul.003G044200 2.0kb upstream 2.0kb upstream 5031 true Chr03: 5160291-5165321 Phaseolus vulgaris
Phvul.003G044200 2.0kb upstream 2.0kb upstream 2000 false Chr03: 5160291-5162290 Phaseolus vulgaris
Phvul.003G044200 2.0kb downstream 2.0kb downstream 5031 true Chr03: 5162291-5167321 Phaseolus vulgaris
Phvul.003G044200 2.0kb downstream 2.0kb downstream 2000 false Chr03: 5165322-5167321 Phaseolus vulgaris
Phvul.003G044200 5.0kb upstream 5.0kb upstream 8031 true Chr03: 5157291-5165321 Phaseolus vulgaris
Phvul.003G044200 5.0kb upstream 5.0kb upstream 5000 false Chr03: 5157291-5162290 Phaseolus vulgaris
Phvul.003G044200 5.0kb downstream 5.0kb downstream 8031 true Chr03: 5162291-5170321 Phaseolus vulgaris
Phvul.003G044200 5.0kb downstream 5.0kb downstream 5000 false Chr03: 5165322-5170321 Phaseolus vulgaris
Phvul.003G044200 10.0kb upstream 10.0kb upstream 13031 true Chr03: 5152291-5165321 Phaseolus vulgaris
Phvul.003G044200 10.0kb upstream 10.0kb upstream 10000 false Chr03: 5152291-5162290 Phaseolus vulgaris
Phvul.003G044200 10.0kb downstream 10.0kb downstream 13031 true Chr03: 5162291-5175321 Phaseolus vulgaris
Phvul.003G044200 10.0kb downstream 10.0kb downstream 10000 false Chr03: 5165322-5175321 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122305746 5265 Fabidae View MSA
124073000 5270 Rosid View MSA
123746333 5271 Pentapetalae View MSA
122785858 5272 Eudicot View MSA
122049143 5273 Angiosperm View MSA
121348944 5274 Embryophyte View MSA
123423800 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 629.006 0.0 2460.2 High  
cufflinks 263.95 0.0 889.124 High Low
cufflinks 377.4 0.0 1482.9 High  
cufflinks 405.167 0.0 1602.85 High  
cufflinks 640.729 0.0 2475.3 High  
cufflinks 265.648 0.0 897.148 High Low
cufflinks 561.917 0.0 2648.36 High  
cufflinks 409.356 0.0 1670.55 High  
cufflinks 1057.65 0.0 4635.49 High High
cufflinks 377.557 0.0 1457.89 High  
cufflinks 362.73 0.0 1355.9 High  

0 Strain