Gene : Phvul.003G044700 P. vulgaris v2.1
Defline:  (1 of 2) PTHR10285:SF76 - URIDINE KINASE Genomic Order:  455
Name:  ? Phvul.003G044700 Secondary Identifier:  ? PAC:37148291
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Sequence Feature Displayer

Ontology Annotation Displayer

2 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-7193 Phaseolus vulgaris pathologic  
Pvulgaris PWY-7196 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G044700 0.5kb upstream 0.5kb upstream 14838 true Chr03: 5221882-5236719 Phaseolus vulgaris
Phvul.003G044700 0.5kb upstream 0.5kb upstream 500 false Chr03: 5236220-5236719 Phaseolus vulgaris
Phvul.003G044700 0.5kb downstream 0.5kb downstream 14838 true Chr03: 5221382-5236219 Phaseolus vulgaris
Phvul.003G044700 0.5kb downstream 0.5kb downstream 500 false Chr03: 5221382-5221881 Phaseolus vulgaris
Phvul.003G044700 1.0kb upstream 1.0kb upstream 15338 true Chr03: 5221882-5237219 Phaseolus vulgaris
Phvul.003G044700 1.0kb upstream 1.0kb upstream 1000 false Chr03: 5236220-5237219 Phaseolus vulgaris
Phvul.003G044700 1.0kb downstream 1.0kb downstream 15338 true Chr03: 5220882-5236219 Phaseolus vulgaris
Phvul.003G044700 1.0kb downstream 1.0kb downstream 1000 false Chr03: 5220882-5221881 Phaseolus vulgaris
Phvul.003G044700 2.0kb upstream 2.0kb upstream 16338 true Chr03: 5221882-5238219 Phaseolus vulgaris
Phvul.003G044700 2.0kb upstream 2.0kb upstream 2000 false Chr03: 5236220-5238219 Phaseolus vulgaris
Phvul.003G044700 2.0kb downstream 2.0kb downstream 16338 true Chr03: 5219882-5236219 Phaseolus vulgaris
Phvul.003G044700 2.0kb downstream 2.0kb downstream 2000 false Chr03: 5219882-5221881 Phaseolus vulgaris
Phvul.003G044700 5.0kb upstream 5.0kb upstream 19338 true Chr03: 5221882-5241219 Phaseolus vulgaris
Phvul.003G044700 5.0kb upstream 5.0kb upstream 5000 false Chr03: 5236220-5241219 Phaseolus vulgaris
Phvul.003G044700 5.0kb downstream 5.0kb downstream 19338 true Chr03: 5216882-5236219 Phaseolus vulgaris
Phvul.003G044700 5.0kb downstream 5.0kb downstream 5000 false Chr03: 5216882-5221881 Phaseolus vulgaris
Phvul.003G044700 10.0kb upstream 10.0kb upstream 24338 true Chr03: 5221882-5246219 Phaseolus vulgaris
Phvul.003G044700 10.0kb upstream 10.0kb upstream 10000 false Chr03: 5236220-5246219 Phaseolus vulgaris
Phvul.003G044700 10.0kb downstream 10.0kb downstream 24338 true Chr03: 5211882-5236219 Phaseolus vulgaris
Phvul.003G044700 10.0kb downstream 10.0kb downstream 10000 false Chr03: 5211882-5221881 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306120 5265 Fabidae View MSA
124070976 5270 Rosid View MSA
123746405 5271 Pentapetalae View MSA
122786866 5272 Eudicot View MSA
122043584 5273 Angiosperm View MSA
121351427 5274 Embryophyte View MSA
123427517 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 2.07608 0.0 8.97432    
cufflinks 3.48082 0.0 16.3447    
cufflinks 13.5609 0.0 49.5781   High
cufflinks 1.79666 0.0 9.7329    
cufflinks 3.21224 0.0 17.635    
cufflinks 5.65256 0.0 23.9097    
cufflinks 3.55281 0.0 17.672    
cufflinks 2.48035 0.0 14.4188    
cufflinks 3.14448 0.0 12.9426    
cufflinks 1.04182 0.0 4.95656   Low
cufflinks 3.33637 0.0 14.5846    

0 Strain