Gene : Phvul.003G045600 P. vulgaris v2.1
Defline:  (1 of 2) PTHR31719:SF40 - NAC TRANSCRIPTION FACTOR 29 Genomic Order:  464
Name:  ? Phvul.003G045600 Secondary Identifier:  ? PAC:37146796
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G045600 0.5kb upstream 0.5kb upstream 1965 true Chr03: 5328410-5330374 Phaseolus vulgaris
Phvul.003G045600 0.5kb upstream 0.5kb upstream 500 false Chr03: 5329875-5330374 Phaseolus vulgaris
Phvul.003G045600 0.5kb downstream 0.5kb downstream 1965 true Chr03: 5327910-5329874 Phaseolus vulgaris
Phvul.003G045600 0.5kb downstream 0.5kb downstream 500 false Chr03: 5327910-5328409 Phaseolus vulgaris
Phvul.003G045600 1.0kb upstream 1.0kb upstream 2465 true Chr03: 5328410-5330874 Phaseolus vulgaris
Phvul.003G045600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 5329875-5330874 Phaseolus vulgaris
Phvul.003G045600 1.0kb downstream 1.0kb downstream 2465 true Chr03: 5327410-5329874 Phaseolus vulgaris
Phvul.003G045600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 5327410-5328409 Phaseolus vulgaris
Phvul.003G045600 2.0kb upstream 2.0kb upstream 3465 true Chr03: 5328410-5331874 Phaseolus vulgaris
Phvul.003G045600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 5329875-5331874 Phaseolus vulgaris
Phvul.003G045600 2.0kb downstream 2.0kb downstream 3465 true Chr03: 5326410-5329874 Phaseolus vulgaris
Phvul.003G045600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 5326410-5328409 Phaseolus vulgaris
Phvul.003G045600 5.0kb upstream 5.0kb upstream 6465 true Chr03: 5328410-5334874 Phaseolus vulgaris
Phvul.003G045600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 5329875-5334874 Phaseolus vulgaris
Phvul.003G045600 5.0kb downstream 5.0kb downstream 6465 true Chr03: 5323410-5329874 Phaseolus vulgaris
Phvul.003G045600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 5323410-5328409 Phaseolus vulgaris
Phvul.003G045600 10.0kb upstream 10.0kb upstream 11465 true Chr03: 5328410-5339874 Phaseolus vulgaris
Phvul.003G045600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 5329875-5339874 Phaseolus vulgaris
Phvul.003G045600 10.0kb downstream 10.0kb downstream 11465 true Chr03: 5318410-5329874 Phaseolus vulgaris
Phvul.003G045600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 5318410-5328409 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306888 5265 Fabidae View MSA
124065483 5270 Rosid View MSA
123736663 5271 Pentapetalae View MSA
122792841 5272 Eudicot View MSA
122049237 5273 Angiosperm View MSA
121349958 5274 Embryophyte View MSA
123381516 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 119.928 0.0 325.509 High High
cufflinks 44.4476 0.0 114.892 High High
cufflinks 1.20524 0.0 4.27392    
cufflinks 2.19469 0.0 7.34752    
cufflinks 1.84678 0.0 6.33721    
cufflinks 0.159192 0.0 0.669124 Low Low
cufflinks 11.0563 0.0 30.773    
cufflinks 4.58536 0.0 13.9397    
cufflinks 8.1096 0.0 23.2355    
cufflinks 11.7757 0.0 32.7592    
cufflinks 1.38412 0.0 4.88767    

0 Strain