Gene : Phvul.003G044600 P. vulgaris v2.1
Defline:  (1 of 2) 2.1.2.5 - Glutamate formimidoyltransferase / Glutamate formyltransferase Genomic Order:  454
Name:  ? Phvul.003G044600 Secondary Identifier:  ? PAC:37145248
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Sequence Feature Displayer

Ontology Annotation Displayer

1 Pathways

Pathway Identifier Organism Name Analysis Method Analysis Status
Pvulgaris PWY-3841 Phaseolus vulgaris pathologic  

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G044600 0.5kb upstream 0.5kb upstream 4493 true Chr03: 5210886-5215378 Phaseolus vulgaris
Phvul.003G044600 0.5kb upstream 0.5kb upstream 500 false Chr03: 5214879-5215378 Phaseolus vulgaris
Phvul.003G044600 0.5kb downstream 0.5kb downstream 4493 true Chr03: 5210386-5214878 Phaseolus vulgaris
Phvul.003G044600 0.5kb downstream 0.5kb downstream 500 false Chr03: 5210386-5210885 Phaseolus vulgaris
Phvul.003G044600 1.0kb upstream 1.0kb upstream 4993 true Chr03: 5210886-5215878 Phaseolus vulgaris
Phvul.003G044600 1.0kb upstream 1.0kb upstream 1000 false Chr03: 5214879-5215878 Phaseolus vulgaris
Phvul.003G044600 1.0kb downstream 1.0kb downstream 4993 true Chr03: 5209886-5214878 Phaseolus vulgaris
Phvul.003G044600 1.0kb downstream 1.0kb downstream 1000 false Chr03: 5209886-5210885 Phaseolus vulgaris
Phvul.003G044600 2.0kb upstream 2.0kb upstream 5993 true Chr03: 5210886-5216878 Phaseolus vulgaris
Phvul.003G044600 2.0kb upstream 2.0kb upstream 2000 false Chr03: 5214879-5216878 Phaseolus vulgaris
Phvul.003G044600 2.0kb downstream 2.0kb downstream 5993 true Chr03: 5208886-5214878 Phaseolus vulgaris
Phvul.003G044600 2.0kb downstream 2.0kb downstream 2000 false Chr03: 5208886-5210885 Phaseolus vulgaris
Phvul.003G044600 5.0kb upstream 5.0kb upstream 8993 true Chr03: 5210886-5219878 Phaseolus vulgaris
Phvul.003G044600 5.0kb upstream 5.0kb upstream 5000 false Chr03: 5214879-5219878 Phaseolus vulgaris
Phvul.003G044600 5.0kb downstream 5.0kb downstream 8993 true Chr03: 5205886-5214878 Phaseolus vulgaris
Phvul.003G044600 5.0kb downstream 5.0kb downstream 5000 false Chr03: 5205886-5210885 Phaseolus vulgaris
Phvul.003G044600 10.0kb upstream 10.0kb upstream 13993 true Chr03: 5210886-5224878 Phaseolus vulgaris
Phvul.003G044600 10.0kb upstream 10.0kb upstream 10000 false Chr03: 5214879-5224878 Phaseolus vulgaris
Phvul.003G044600 10.0kb downstream 10.0kb downstream 13993 true Chr03: 5200886-5214878 Phaseolus vulgaris
Phvul.003G044600 10.0kb downstream 10.0kb downstream 10000 false Chr03: 5200886-5210885 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122306444 5265 Fabidae View MSA
124070892 5270 Rosid View MSA
123745948 5271 Pentapetalae View MSA
122795317 5272 Eudicot View MSA
122048049 5273 Angiosperm View MSA
121344000 5274 Embryophyte View MSA
123424939 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 7.53281 0.0 29.5505    
cufflinks 18.8688 0.0 62.004    
cufflinks 23.0361 0.0 74.3707   High
cufflinks 7.83486 0.0 29.7356    
cufflinks 16.6678 0.0 55.264    
cufflinks 13.2032 0.0 46.0686    
cufflinks 2.06152 0.0 9.50192   Low
cufflinks 1.40737 0.0 7.29289   Low
cufflinks 11.1873 0.0 34.044    
cufflinks 7.74634 0.0 30.1533    
cufflinks 11.3644 0.0 40.1966    

0 Strain