Gene : Phvul.003G044500 P. vulgaris v2.1
Defline:  (1 of 2) PF07723//PF08387 - Leucine Rich Repeat (LRR_2) // FBD (FBD) Genomic Order:  453
Name:  ? Phvul.003G044500 Secondary Identifier:  ? PAC:37144729
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G044500 0.5kb upstream 0.5kb upstream 2626 true Chr03: 5200090-5202715 Phaseolus vulgaris
Phvul.003G044500 0.5kb upstream 0.5kb upstream 500 false Chr03: 5202216-5202715 Phaseolus vulgaris
Phvul.003G044500 0.5kb downstream 0.5kb downstream 2626 true Chr03: 5199590-5202215 Phaseolus vulgaris
Phvul.003G044500 0.5kb downstream 0.5kb downstream 500 false Chr03: 5199590-5200089 Phaseolus vulgaris
Phvul.003G044500 1.0kb upstream 1.0kb upstream 3126 true Chr03: 5200090-5203215 Phaseolus vulgaris
Phvul.003G044500 1.0kb upstream 1.0kb upstream 1000 false Chr03: 5202216-5203215 Phaseolus vulgaris
Phvul.003G044500 1.0kb downstream 1.0kb downstream 3126 true Chr03: 5199090-5202215 Phaseolus vulgaris
Phvul.003G044500 1.0kb downstream 1.0kb downstream 1000 false Chr03: 5199090-5200089 Phaseolus vulgaris
Phvul.003G044500 2.0kb upstream 2.0kb upstream 4126 true Chr03: 5200090-5204215 Phaseolus vulgaris
Phvul.003G044500 2.0kb upstream 2.0kb upstream 2000 false Chr03: 5202216-5204215 Phaseolus vulgaris
Phvul.003G044500 2.0kb downstream 2.0kb downstream 4126 true Chr03: 5198090-5202215 Phaseolus vulgaris
Phvul.003G044500 2.0kb downstream 2.0kb downstream 2000 false Chr03: 5198090-5200089 Phaseolus vulgaris
Phvul.003G044500 5.0kb upstream 5.0kb upstream 7126 true Chr03: 5200090-5207215 Phaseolus vulgaris
Phvul.003G044500 5.0kb upstream 5.0kb upstream 5000 false Chr03: 5202216-5207215 Phaseolus vulgaris
Phvul.003G044500 5.0kb downstream 5.0kb downstream 7126 true Chr03: 5195090-5202215 Phaseolus vulgaris
Phvul.003G044500 5.0kb downstream 5.0kb downstream 5000 false Chr03: 5195090-5200089 Phaseolus vulgaris
Phvul.003G044500 10.0kb upstream 10.0kb upstream 12126 true Chr03: 5200090-5212215 Phaseolus vulgaris
Phvul.003G044500 10.0kb upstream 10.0kb upstream 10000 false Chr03: 5202216-5212215 Phaseolus vulgaris
Phvul.003G044500 10.0kb downstream 10.0kb downstream 12126 true Chr03: 5190090-5202215 Phaseolus vulgaris
Phvul.003G044500 10.0kb downstream 10.0kb downstream 10000 false Chr03: 5190090-5200089 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122304842 5265 Fabidae View MSA
124071002 5270 Rosid View MSA
123753592 5271 Pentapetalae View MSA
122797964 5272 Eudicot View MSA
122050940 5273 Angiosperm View MSA
121351679 5274 Embryophyte View MSA
123382274 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.3109 0.0 4.44945   Low
cufflinks 2.53495 0.0 8.03116    
cufflinks 3.24328 0.0 9.9387    
cufflinks 3.00914 0.0 9.4198    
cufflinks 3.1626 0.0 9.80349    
cufflinks 2.51162 0.0 7.9638    
cufflinks 2.51439 0.0 8.00122    
cufflinks 3.13869 0.0 9.67215    
cufflinks 2.49348 0.0 7.98725    
cufflinks 2.49294 0.0 7.90754    
cufflinks 2.59403 0.0 8.24392    

0 Strain