Gene : Phvul.003G049300 P. vulgaris v2.1
Defline:  (1 of 2) K03869 - cullin 3 (CUL3) Genomic Order:  506
Name:  ? Phvul.003G049300 Secondary Identifier:  ? PAC:37148095
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0 Pathways

Genomics

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Expression

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Cufflinks Score Displayer

 

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G049300 0.5kb upstream 0.5kb upstream 7962 true Chr03: 6134664-6142625 Phaseolus vulgaris
Phvul.003G049300 0.5kb upstream 0.5kb upstream 500 false Chr03: 6142126-6142625 Phaseolus vulgaris
Phvul.003G049300 0.5kb downstream 0.5kb downstream 7962 true Chr03: 6134164-6142125 Phaseolus vulgaris
Phvul.003G049300 0.5kb downstream 0.5kb downstream 500 false Chr03: 6134164-6134663 Phaseolus vulgaris
Phvul.003G049300 1.0kb upstream 1.0kb upstream 8462 true Chr03: 6134664-6143125 Phaseolus vulgaris
Phvul.003G049300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 6142126-6143125 Phaseolus vulgaris
Phvul.003G049300 1.0kb downstream 1.0kb downstream 8462 true Chr03: 6133664-6142125 Phaseolus vulgaris
Phvul.003G049300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 6133664-6134663 Phaseolus vulgaris
Phvul.003G049300 2.0kb upstream 2.0kb upstream 9462 true Chr03: 6134664-6144125 Phaseolus vulgaris
Phvul.003G049300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 6142126-6144125 Phaseolus vulgaris
Phvul.003G049300 2.0kb downstream 2.0kb downstream 9462 true Chr03: 6132664-6142125 Phaseolus vulgaris
Phvul.003G049300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 6132664-6134663 Phaseolus vulgaris
Phvul.003G049300 5.0kb upstream 5.0kb upstream 12462 true Chr03: 6134664-6147125 Phaseolus vulgaris
Phvul.003G049300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 6142126-6147125 Phaseolus vulgaris
Phvul.003G049300 5.0kb downstream 5.0kb downstream 12462 true Chr03: 6129664-6142125 Phaseolus vulgaris
Phvul.003G049300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 6129664-6134663 Phaseolus vulgaris
Phvul.003G049300 10.0kb upstream 10.0kb upstream 17462 true Chr03: 6134664-6152125 Phaseolus vulgaris
Phvul.003G049300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 6142126-6152125 Phaseolus vulgaris
Phvul.003G049300 10.0kb downstream 10.0kb downstream 17462 true Chr03: 6124664-6142125 Phaseolus vulgaris
Phvul.003G049300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 6124664-6134663 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122301106 5265 Fabidae View MSA
124060963 5270 Rosid View MSA
123747222 5271 Pentapetalae View MSA
122785909 5272 Eudicot View MSA
122047217 5273 Angiosperm View MSA
121346252 5274 Embryophyte View MSA
123427758 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 10.4651 0.0 29.6293    
cufflinks 6.19907 0.0 18.6974   Low
cufflinks 8.8799 0.0 25.3708    
cufflinks 4.88911 0.0 15.5166   Low
cufflinks 7.18891 0.0 21.5822    
cufflinks 9.91692 0.0 28.1657    
cufflinks 10.4787 0.0 29.8002    
cufflinks 7.8516 0.0 22.6227    
cufflinks 11.7508 0.0 33.0929   High
cufflinks 8.17071 0.0 23.7581    
cufflinks 8.44338 0.0 24.5478    

0 Strain