Gene : Phvul.003G162800 P. vulgaris v2.1
Defline:  (1 of 2) PTHR21198 - GLUTAMATE RACEMASE Genomic Order:  1655
Name:  ? Phvul.003G162800 Secondary Identifier:  ? PAC:37147446
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Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G162800 0.5kb upstream 0.5kb upstream 2216 true Chr03: 38191373-38193588 Phaseolus vulgaris
Phvul.003G162800 0.5kb upstream 0.5kb upstream 500 false Chr03: 38193089-38193588 Phaseolus vulgaris
Phvul.003G162800 0.5kb downstream 0.5kb downstream 2216 true Chr03: 38190873-38193088 Phaseolus vulgaris
Phvul.003G162800 0.5kb downstream 0.5kb downstream 500 false Chr03: 38190873-38191372 Phaseolus vulgaris
Phvul.003G162800 1.0kb upstream 1.0kb upstream 2716 true Chr03: 38191373-38194088 Phaseolus vulgaris
Phvul.003G162800 1.0kb upstream 1.0kb upstream 1000 false Chr03: 38193089-38194088 Phaseolus vulgaris
Phvul.003G162800 1.0kb downstream 1.0kb downstream 2716 true Chr03: 38190373-38193088 Phaseolus vulgaris
Phvul.003G162800 1.0kb downstream 1.0kb downstream 1000 false Chr03: 38190373-38191372 Phaseolus vulgaris
Phvul.003G162800 2.0kb upstream 2.0kb upstream 3716 true Chr03: 38191373-38195088 Phaseolus vulgaris
Phvul.003G162800 2.0kb upstream 2.0kb upstream 2000 false Chr03: 38193089-38195088 Phaseolus vulgaris
Phvul.003G162800 2.0kb downstream 2.0kb downstream 3716 true Chr03: 38189373-38193088 Phaseolus vulgaris
Phvul.003G162800 2.0kb downstream 2.0kb downstream 2000 false Chr03: 38189373-38191372 Phaseolus vulgaris
Phvul.003G162800 5.0kb upstream 5.0kb upstream 6716 true Chr03: 38191373-38198088 Phaseolus vulgaris
Phvul.003G162800 5.0kb upstream 5.0kb upstream 5000 false Chr03: 38193089-38198088 Phaseolus vulgaris
Phvul.003G162800 5.0kb downstream 5.0kb downstream 6716 true Chr03: 38186373-38193088 Phaseolus vulgaris
Phvul.003G162800 5.0kb downstream 5.0kb downstream 5000 false Chr03: 38186373-38191372 Phaseolus vulgaris
Phvul.003G162800 10.0kb upstream 10.0kb upstream 11716 true Chr03: 38191373-38203088 Phaseolus vulgaris
Phvul.003G162800 10.0kb upstream 10.0kb upstream 10000 false Chr03: 38193089-38203088 Phaseolus vulgaris
Phvul.003G162800 10.0kb downstream 10.0kb downstream 11716 true Chr03: 38181373-38193088 Phaseolus vulgaris
Phvul.003G162800 10.0kb downstream 10.0kb downstream 10000 false Chr03: 38181373-38191372 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122313050 5265 Fabidae View MSA
124070662 5270 Rosid View MSA
123749340 5271 Pentapetalae View MSA
122786043 5272 Eudicot View MSA
122047895 5273 Angiosperm View MSA
121310810 5274 Embryophyte View MSA
123348207 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.540793 0.0 1.98815    
cufflinks 3.3108 0.0 10.0063    
cufflinks 0.335322 0.0 1.2788 Low  
cufflinks 1.07706 0.0 3.73539    
cufflinks 0.351551 0.0 1.34612 Low  
cufflinks 0.580363 0.0 2.11664    
cufflinks 1.39521 0.0 4.65206    
cufflinks 4.30926 0.0 12.5794   High
cufflinks 0.122969 0.0 0.510057 Low Low
cufflinks 13.9557 0.0 36.8982   High
cufflinks 1.46583 0.0 4.89378    

0 Strain