Gene : Phvul.003G163300 P. vulgaris v2.1
Defline:  (1 of 1) PTHR11886//PTHR11886:SF51 - DYNEIN LIGHT CHAIN // SUBFAMILY NOT NAMED Genomic Order:  1660
Name:  ? Phvul.003G163300 Secondary Identifier:  ? PAC:37146710
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Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G163300 0.5kb upstream 0.5kb upstream 2748 true Chr03: 38225336-38228083 Phaseolus vulgaris
Phvul.003G163300 0.5kb upstream 0.5kb upstream 500 false Chr03: 38227584-38228083 Phaseolus vulgaris
Phvul.003G163300 0.5kb downstream 0.5kb downstream 2748 true Chr03: 38224836-38227583 Phaseolus vulgaris
Phvul.003G163300 0.5kb downstream 0.5kb downstream 500 false Chr03: 38224836-38225335 Phaseolus vulgaris
Phvul.003G163300 1.0kb upstream 1.0kb upstream 3248 true Chr03: 38225336-38228583 Phaseolus vulgaris
Phvul.003G163300 1.0kb upstream 1.0kb upstream 1000 false Chr03: 38227584-38228583 Phaseolus vulgaris
Phvul.003G163300 1.0kb downstream 1.0kb downstream 3248 true Chr03: 38224336-38227583 Phaseolus vulgaris
Phvul.003G163300 1.0kb downstream 1.0kb downstream 1000 false Chr03: 38224336-38225335 Phaseolus vulgaris
Phvul.003G163300 2.0kb upstream 2.0kb upstream 4248 true Chr03: 38225336-38229583 Phaseolus vulgaris
Phvul.003G163300 2.0kb upstream 2.0kb upstream 2000 false Chr03: 38227584-38229583 Phaseolus vulgaris
Phvul.003G163300 2.0kb downstream 2.0kb downstream 4248 true Chr03: 38223336-38227583 Phaseolus vulgaris
Phvul.003G163300 2.0kb downstream 2.0kb downstream 2000 false Chr03: 38223336-38225335 Phaseolus vulgaris
Phvul.003G163300 5.0kb upstream 5.0kb upstream 7248 true Chr03: 38225336-38232583 Phaseolus vulgaris
Phvul.003G163300 5.0kb upstream 5.0kb upstream 5000 false Chr03: 38227584-38232583 Phaseolus vulgaris
Phvul.003G163300 5.0kb downstream 5.0kb downstream 7248 true Chr03: 38220336-38227583 Phaseolus vulgaris
Phvul.003G163300 5.0kb downstream 5.0kb downstream 5000 false Chr03: 38220336-38225335 Phaseolus vulgaris
Phvul.003G163300 10.0kb upstream 10.0kb upstream 12248 true Chr03: 38225336-38237583 Phaseolus vulgaris
Phvul.003G163300 10.0kb upstream 10.0kb upstream 10000 false Chr03: 38227584-38237583 Phaseolus vulgaris
Phvul.003G163300 10.0kb downstream 10.0kb downstream 12248 true Chr03: 38215336-38227583 Phaseolus vulgaris
Phvul.003G163300 10.0kb downstream 10.0kb downstream 10000 false Chr03: 38215336-38225335 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122297735 5265 Fabidae View MSA
124066792 5270 Rosid View MSA
123747752 5271 Pentapetalae View MSA
122794062 5272 Eudicot View MSA
122048420 5273 Angiosperm View MSA
121310962 5274 Embryophyte View MSA
123348328 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 1.50508 0.0 6.32155    
cufflinks 1.40376 0.0 5.92023    
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 2.23705 0.0 8.57132    
cufflinks 0.939793 0.0 4.12224    
cufflinks 0.113219 0.0 0.498335 Low Low
cufflinks 5.49396 0.0 20.6176    
cufflinks 2.70732 0.0 12.4077    
cufflinks 7.10781 0.0 29.2014   High
cufflinks 7.76835 0.0 32.4612   High
cufflinks 1.77529 0.0 9.28619    

0 Strain