Gene : Phvul.003G163000 P. vulgaris v2.1
Defline:  (1 of 135) PF00646 - F-box domain (F-box) Genomic Order:  1657
Name:  ? Phvul.003G163000 Secondary Identifier:  ? PAC:37147686
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0 Pathways

Genomics

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Expression

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1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G163000 0.5kb upstream 0.5kb upstream 1649 true Chr03: 38208068-38209716 Phaseolus vulgaris
Phvul.003G163000 0.5kb upstream 0.5kb upstream 500 false Chr03: 38209217-38209716 Phaseolus vulgaris
Phvul.003G163000 0.5kb downstream 0.5kb downstream 1649 true Chr03: 38207568-38209216 Phaseolus vulgaris
Phvul.003G163000 0.5kb downstream 0.5kb downstream 500 false Chr03: 38207568-38208067 Phaseolus vulgaris
Phvul.003G163000 1.0kb upstream 1.0kb upstream 2149 true Chr03: 38208068-38210216 Phaseolus vulgaris
Phvul.003G163000 1.0kb upstream 1.0kb upstream 1000 false Chr03: 38209217-38210216 Phaseolus vulgaris
Phvul.003G163000 1.0kb downstream 1.0kb downstream 2149 true Chr03: 38207068-38209216 Phaseolus vulgaris
Phvul.003G163000 1.0kb downstream 1.0kb downstream 1000 false Chr03: 38207068-38208067 Phaseolus vulgaris
Phvul.003G163000 2.0kb upstream 2.0kb upstream 3149 true Chr03: 38208068-38211216 Phaseolus vulgaris
Phvul.003G163000 2.0kb upstream 2.0kb upstream 2000 false Chr03: 38209217-38211216 Phaseolus vulgaris
Phvul.003G163000 2.0kb downstream 2.0kb downstream 3149 true Chr03: 38206068-38209216 Phaseolus vulgaris
Phvul.003G163000 2.0kb downstream 2.0kb downstream 2000 false Chr03: 38206068-38208067 Phaseolus vulgaris
Phvul.003G163000 5.0kb upstream 5.0kb upstream 6149 true Chr03: 38208068-38214216 Phaseolus vulgaris
Phvul.003G163000 5.0kb upstream 5.0kb upstream 5000 false Chr03: 38209217-38214216 Phaseolus vulgaris
Phvul.003G163000 5.0kb downstream 5.0kb downstream 6149 true Chr03: 38203068-38209216 Phaseolus vulgaris
Phvul.003G163000 5.0kb downstream 5.0kb downstream 5000 false Chr03: 38203068-38208067 Phaseolus vulgaris
Phvul.003G163000 10.0kb upstream 10.0kb upstream 11149 true Chr03: 38208068-38219216 Phaseolus vulgaris
Phvul.003G163000 10.0kb upstream 10.0kb upstream 10000 false Chr03: 38209217-38219216 Phaseolus vulgaris
Phvul.003G163000 10.0kb downstream 10.0kb downstream 11149 true Chr03: 38198068-38209216 Phaseolus vulgaris
Phvul.003G163000 10.0kb downstream 10.0kb downstream 10000 false Chr03: 38198068-38208067 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122315521 5265 Fabidae View MSA
124040737 5270 Rosid View MSA
123754486 5271 Pentapetalae View MSA
122797953 5272 Eudicot View MSA
122051694 5273 Angiosperm View MSA
121351156 5274 Embryophyte View MSA
123382030 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0750402 0.0 0.348572 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0470518 0.0 0.230437 Low Low
cufflinks 0.0664664 0.0 0.312005 Low  
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed
cufflinks 0.0 0.0 0.0 Not Expressed Not Expressed

0 Strain