Gene : Phvul.003G166100 P. vulgaris v2.1
Defline:  (1 of 1) PTHR31675:SF6 - AXIAL REGULATOR YABBY 5 Genomic Order:  1688
Name:  ? Phvul.003G166100 Secondary Identifier:  ? PAC:37144376
Paste the following link

Sequence Feature Displayer

Ontology Annotation Displayer

0 Pathways

Genomics

Gene Ontology Displayer

Gene Structure Displayer

Expression

Correlated Expression Displayer

Cufflinks Score Displayer

 

Other

1 Synonyms

20 Flanking Regions

Region Name Flank Size Direction Length Gene Included? Chromosome Location Organism Name
Phvul.003G166100 0.5kb upstream 0.5kb upstream 4298 true Chr03: 38602330-38606627 Phaseolus vulgaris
Phvul.003G166100 0.5kb upstream 0.5kb upstream 500 false Chr03: 38606128-38606627 Phaseolus vulgaris
Phvul.003G166100 0.5kb downstream 0.5kb downstream 4298 true Chr03: 38601830-38606127 Phaseolus vulgaris
Phvul.003G166100 0.5kb downstream 0.5kb downstream 500 false Chr03: 38601830-38602329 Phaseolus vulgaris
Phvul.003G166100 1.0kb upstream 1.0kb upstream 4798 true Chr03: 38602330-38607127 Phaseolus vulgaris
Phvul.003G166100 1.0kb upstream 1.0kb upstream 1000 false Chr03: 38606128-38607127 Phaseolus vulgaris
Phvul.003G166100 1.0kb downstream 1.0kb downstream 4798 true Chr03: 38601330-38606127 Phaseolus vulgaris
Phvul.003G166100 1.0kb downstream 1.0kb downstream 1000 false Chr03: 38601330-38602329 Phaseolus vulgaris
Phvul.003G166100 2.0kb upstream 2.0kb upstream 5798 true Chr03: 38602330-38608127 Phaseolus vulgaris
Phvul.003G166100 2.0kb upstream 2.0kb upstream 2000 false Chr03: 38606128-38608127 Phaseolus vulgaris
Phvul.003G166100 2.0kb downstream 2.0kb downstream 5798 true Chr03: 38600330-38606127 Phaseolus vulgaris
Phvul.003G166100 2.0kb downstream 2.0kb downstream 2000 false Chr03: 38600330-38602329 Phaseolus vulgaris
Phvul.003G166100 5.0kb upstream 5.0kb upstream 8798 true Chr03: 38602330-38611127 Phaseolus vulgaris
Phvul.003G166100 5.0kb upstream 5.0kb upstream 5000 false Chr03: 38606128-38611127 Phaseolus vulgaris
Phvul.003G166100 5.0kb downstream 5.0kb downstream 8798 true Chr03: 38597330-38606127 Phaseolus vulgaris
Phvul.003G166100 5.0kb downstream 5.0kb downstream 5000 false Chr03: 38597330-38602329 Phaseolus vulgaris
Phvul.003G166100 10.0kb upstream 10.0kb upstream 13798 true Chr03: 38602330-38616127 Phaseolus vulgaris
Phvul.003G166100 10.0kb upstream 10.0kb upstream 10000 false Chr03: 38606128-38616127 Phaseolus vulgaris
Phvul.003G166100 10.0kb downstream 10.0kb downstream 13798 true Chr03: 38592330-38606127 Phaseolus vulgaris
Phvul.003G166100 10.0kb downstream 10.0kb downstream 10000 false Chr03: 38592330-38602329 Phaseolus vulgaris

7 Protein Familys

Cluster ID Method ID Method Name Sequence Alignment
122302436 5265 Fabidae View MSA
124061031 5270 Rosid View MSA
123739055 5271 Pentapetalae View MSA
122791721 5272 Eudicot View MSA
122048465 5273 Angiosperm View MSA
121349155 5274 Embryophyte View MSA
123426058 5275 Viridiplantae View MSA

11 Rna Seq Expressionss

Analysis Method Abundance Low Confidence Limit High Confidence Limit Relative Library Expression Relative Locus Expression
cufflinks 8.97059 0.0 26.0371    
cufflinks 0.615803 0.0 2.35461    
cufflinks 30.5435 0.0 79.8463    
cufflinks 93.1037 0.0 245.538 High High
cufflinks 11.8324 0.0 33.4486    
cufflinks 35.7881 0.0 92.9883 High High
cufflinks 0.0394423 0.0 0.19317 Low Low
cufflinks 0.0594857 0.0 0.279236 Low Low
cufflinks 0.084786 0.0 0.383104 Low Low
cufflinks 0.0588453 0.0 0.278013 Low Low
cufflinks 8.03155 0.0 23.5633    

0 Strain